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Unlocking the strength of inducible promoters in Gram‐negative bacteria

Inducible bacterial promoters are ubiquitous biotechnology tools that have a consistent architecture including two key elements: the operator region recognized by the transcriptional regulatory proteins, and the −10 and −35 consensus sequences required to recruit the sigma (σ) 70 subunits of RNA pol...

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Autores principales: Carrillo Rincón, Andrés Felipe, Farny, Natalie G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10128130/
https://www.ncbi.nlm.nih.gov/pubmed/36738130
http://dx.doi.org/10.1111/1751-7915.14219
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author Carrillo Rincón, Andrés Felipe
Farny, Natalie G.
author_facet Carrillo Rincón, Andrés Felipe
Farny, Natalie G.
author_sort Carrillo Rincón, Andrés Felipe
collection PubMed
description Inducible bacterial promoters are ubiquitous biotechnology tools that have a consistent architecture including two key elements: the operator region recognized by the transcriptional regulatory proteins, and the −10 and −35 consensus sequences required to recruit the sigma (σ) 70 subunits of RNA polymerase to initiate transcription. Despite their widespread use, leaky transcription in the OFF state remains a challenge. We have updated the architecture of the lac and tet promoters to improve their strength, control and portability by the adaptation of the consensus −10 and −35 sequence boxes strongly targeted by σ(70), incorporation of a strong ribosome binding site recognized broadly by Gram‐negative bacteria, and independent control of the transcriptional regulators by constitutive promoters. To test the promoters, we use the far‐red fluorescent protein mCardinal, which significantly improves the signal‐to‐background ratio of promoter measurements over widely utilized green fluorescent proteins. We validate the improvement in OFF state control and inducibility by demonstrating production of the toxic and aggregate‐prone cocaine esterase enzyme CocE. We further demonstrate portability of the promoters to additional Gram‐negative species Pseudomonas putida and Vibrio natriegens. Our results represent a significant improvement over existing protein expression systems that will enable advances in protein production for various biotechnology applications.
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spelling pubmed-101281302023-04-26 Unlocking the strength of inducible promoters in Gram‐negative bacteria Carrillo Rincón, Andrés Felipe Farny, Natalie G. Microb Biotechnol Regular Issue Inducible bacterial promoters are ubiquitous biotechnology tools that have a consistent architecture including two key elements: the operator region recognized by the transcriptional regulatory proteins, and the −10 and −35 consensus sequences required to recruit the sigma (σ) 70 subunits of RNA polymerase to initiate transcription. Despite their widespread use, leaky transcription in the OFF state remains a challenge. We have updated the architecture of the lac and tet promoters to improve their strength, control and portability by the adaptation of the consensus −10 and −35 sequence boxes strongly targeted by σ(70), incorporation of a strong ribosome binding site recognized broadly by Gram‐negative bacteria, and independent control of the transcriptional regulators by constitutive promoters. To test the promoters, we use the far‐red fluorescent protein mCardinal, which significantly improves the signal‐to‐background ratio of promoter measurements over widely utilized green fluorescent proteins. We validate the improvement in OFF state control and inducibility by demonstrating production of the toxic and aggregate‐prone cocaine esterase enzyme CocE. We further demonstrate portability of the promoters to additional Gram‐negative species Pseudomonas putida and Vibrio natriegens. Our results represent a significant improvement over existing protein expression systems that will enable advances in protein production for various biotechnology applications. John Wiley and Sons Inc. 2023-02-03 /pmc/articles/PMC10128130/ /pubmed/36738130 http://dx.doi.org/10.1111/1751-7915.14219 Text en © 2023 The Authors. Microbial Biotechnology published by Applied Microbiology International and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Regular Issue
Carrillo Rincón, Andrés Felipe
Farny, Natalie G.
Unlocking the strength of inducible promoters in Gram‐negative bacteria
title Unlocking the strength of inducible promoters in Gram‐negative bacteria
title_full Unlocking the strength of inducible promoters in Gram‐negative bacteria
title_fullStr Unlocking the strength of inducible promoters in Gram‐negative bacteria
title_full_unstemmed Unlocking the strength of inducible promoters in Gram‐negative bacteria
title_short Unlocking the strength of inducible promoters in Gram‐negative bacteria
title_sort unlocking the strength of inducible promoters in gram‐negative bacteria
topic Regular Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10128130/
https://www.ncbi.nlm.nih.gov/pubmed/36738130
http://dx.doi.org/10.1111/1751-7915.14219
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