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43 Random Forest Model Approaches to Build Prediction Models of Cognitive Impairment Using the National Alzheimer’s Coordinating Center database
OBJECTIVES/GOALS: Our goal is to explore the complex, the non-linear interplay among chronic conditions collectively contributing to a greater detrimental impact on the progression of Alzheimer’s disease (AD) than a single chronic condition alone in individuals with normal cognition, MCI, and AD. ME...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cambridge University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10129561/ http://dx.doi.org/10.1017/cts.2023.135 |
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author | Moon, Chooza Wang, Boxiang Gardner, Sue Geerling, Joel Hoth, Karn |
author_facet | Moon, Chooza Wang, Boxiang Gardner, Sue Geerling, Joel Hoth, Karn |
author_sort | Moon, Chooza |
collection | PubMed |
description | OBJECTIVES/GOALS: Our goal is to explore the complex, the non-linear interplay among chronic conditions collectively contributing to a greater detrimental impact on the progression of Alzheimer’s disease (AD) than a single chronic condition alone in individuals with normal cognition, MCI, and AD. METHODS/STUDY POPULATION: We used longitudinal data from National Alzheimer Coordinating Center (n = 41,437) and focused on individuals with normal cognition (n =16,884, mean age (SD) = 70.72 (9.7)). Random forest models were used to predict newly developed MCI or AD from baseline to the most recent visits. We used self-reported baseline data on 50 chronic conditions and comprehensive clinical and demographic information (e.g., age, sex, APOE status, mini-mental status exam (MMSE) scores, education, BMI, and depressive symptoms). A binomial random forest was used to identify significant interactions (with p-values RESULTS/ANTICIPATED RESULTS: Our model demonstrated an AUC of 0.708 and a classification error rate of 25.4%. Variables of importance for predicting MCI or dementia were age, coronary artery bypass, depression, APOE status, smoking, and depressive symptoms. Two-way interactions, such as age X MMSE score, age X depressive symptoms, and age X BMI, were significant. Three-way interactions, including age X depressive symptoms X MMSE score, or depressive symptoms X BMI X MMSE score, were significant. However, when we explored the random forest model using only the chronic condition data, we found an AUC of 0.602 and an error rate of 27.15%. We found that depression, anxiety, hypercholesterolemia, stroke, and the interaction between BMI and anxiety were significant. DISCUSSION/SIGNIFICANCE: Random Forest models indicate that not only known factors including age, baseline cognitive status, and APOE status, but also chronic conditions like depression, anxiety, hypercholesterolemia, and stroke may predict cognitive impairment. |
format | Online Article Text |
id | pubmed-10129561 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Cambridge University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-101295612023-04-26 43 Random Forest Model Approaches to Build Prediction Models of Cognitive Impairment Using the National Alzheimer’s Coordinating Center database Moon, Chooza Wang, Boxiang Gardner, Sue Geerling, Joel Hoth, Karn J Clin Transl Sci Biostatistics, Epidemiology, and Research Design OBJECTIVES/GOALS: Our goal is to explore the complex, the non-linear interplay among chronic conditions collectively contributing to a greater detrimental impact on the progression of Alzheimer’s disease (AD) than a single chronic condition alone in individuals with normal cognition, MCI, and AD. METHODS/STUDY POPULATION: We used longitudinal data from National Alzheimer Coordinating Center (n = 41,437) and focused on individuals with normal cognition (n =16,884, mean age (SD) = 70.72 (9.7)). Random forest models were used to predict newly developed MCI or AD from baseline to the most recent visits. We used self-reported baseline data on 50 chronic conditions and comprehensive clinical and demographic information (e.g., age, sex, APOE status, mini-mental status exam (MMSE) scores, education, BMI, and depressive symptoms). A binomial random forest was used to identify significant interactions (with p-values RESULTS/ANTICIPATED RESULTS: Our model demonstrated an AUC of 0.708 and a classification error rate of 25.4%. Variables of importance for predicting MCI or dementia were age, coronary artery bypass, depression, APOE status, smoking, and depressive symptoms. Two-way interactions, such as age X MMSE score, age X depressive symptoms, and age X BMI, were significant. Three-way interactions, including age X depressive symptoms X MMSE score, or depressive symptoms X BMI X MMSE score, were significant. However, when we explored the random forest model using only the chronic condition data, we found an AUC of 0.602 and an error rate of 27.15%. We found that depression, anxiety, hypercholesterolemia, stroke, and the interaction between BMI and anxiety were significant. DISCUSSION/SIGNIFICANCE: Random Forest models indicate that not only known factors including age, baseline cognitive status, and APOE status, but also chronic conditions like depression, anxiety, hypercholesterolemia, and stroke may predict cognitive impairment. Cambridge University Press 2023-04-24 /pmc/articles/PMC10129561/ http://dx.doi.org/10.1017/cts.2023.135 Text en © The Association for Clinical and Translational Science 2023 https://creativecommons.org/licenses/by-nc-nd/4.0/This is an Open Access article, distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives licence (https://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is unaltered and is properly cited. The written permission of Cambridge University Press must be obtained for commercial re-use or in order to create a derivative work. |
spellingShingle | Biostatistics, Epidemiology, and Research Design Moon, Chooza Wang, Boxiang Gardner, Sue Geerling, Joel Hoth, Karn 43 Random Forest Model Approaches to Build Prediction Models of Cognitive Impairment Using the National Alzheimer’s Coordinating Center database |
title | 43 Random Forest Model Approaches to Build Prediction Models of Cognitive Impairment Using the National Alzheimer’s Coordinating Center database |
title_full | 43 Random Forest Model Approaches to Build Prediction Models of Cognitive Impairment Using the National Alzheimer’s Coordinating Center database |
title_fullStr | 43 Random Forest Model Approaches to Build Prediction Models of Cognitive Impairment Using the National Alzheimer’s Coordinating Center database |
title_full_unstemmed | 43 Random Forest Model Approaches to Build Prediction Models of Cognitive Impairment Using the National Alzheimer’s Coordinating Center database |
title_short | 43 Random Forest Model Approaches to Build Prediction Models of Cognitive Impairment Using the National Alzheimer’s Coordinating Center database |
title_sort | 43 random forest model approaches to build prediction models of cognitive impairment using the national alzheimer’s coordinating center database |
topic | Biostatistics, Epidemiology, and Research Design |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10129561/ http://dx.doi.org/10.1017/cts.2023.135 |
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