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384 Alterations in the fungal microbiome in ulcerative colitis
OBJECTIVES/GOALS: Although gut fungi have been implicated in the immunopathogenesis of inflammatory bowel disease, the fungal microbiome has not been deeply explored across endo-histologic activity and treatment-exposure in ulcerative colitis. METHODS/STUDY POPULATION: Our retrospective cohort was d...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cambridge University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10129763/ http://dx.doi.org/10.1017/cts.2023.420 |
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author | Jangi, Sushrut Hsia, Katie Zhao, Naisi Chung, Mei Algarrahi, Khalid Kouhsari, Laleh Montaser Fu, May Chen, Hannah Singh, Siddharth Michaud, S. |
author_facet | Jangi, Sushrut Hsia, Katie Zhao, Naisi Chung, Mei Algarrahi, Khalid Kouhsari, Laleh Montaser Fu, May Chen, Hannah Singh, Siddharth Michaud, S. |
author_sort | Jangi, Sushrut |
collection | PubMed |
description | OBJECTIVES/GOALS: Although gut fungi have been implicated in the immunopathogenesis of inflammatory bowel disease, the fungal microbiome has not been deeply explored across endo-histologic activity and treatment-exposure in ulcerative colitis. METHODS/STUDY POPULATION: Our retrospective cohort was derived from the Study of a Prospective Adult Research Cohort with Inflammatory Bowel Disease. We evaluated the fungal composition of fecal samples from 98 ulcerative colitis patients across endoscopic activity (n=43), endo-histologic activity (n=41), and biologic-exposure (n=98). Across all subgroups, we assessed fungal diversity and differential abundance of specific taxonomic groups. RESULTS/ANTICIPATED RESULTS: We identified 504 unique fungal amplicon sequence variants across the cohort of 98 patients, dominated by phylum Ascomycota. Compared to endoscopic remission, patients with endoscopic activity had an increased global fungus load (p DISCUSSION/SIGNIFICANCE: Endoscopic inflammation in ulcerative colitis is associated with altered fungal diversity driven by expansion of Saccharomyces and Candida compared to remission. The role of these fungal taxa as potential biomarkers and targets for personalized approaches to therapeutics in ulcerative colitis should be evaluated. |
format | Online Article Text |
id | pubmed-10129763 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Cambridge University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-101297632023-04-26 384 Alterations in the fungal microbiome in ulcerative colitis Jangi, Sushrut Hsia, Katie Zhao, Naisi Chung, Mei Algarrahi, Khalid Kouhsari, Laleh Montaser Fu, May Chen, Hannah Singh, Siddharth Michaud, S. J Clin Transl Sci Precision Medicine/Health OBJECTIVES/GOALS: Although gut fungi have been implicated in the immunopathogenesis of inflammatory bowel disease, the fungal microbiome has not been deeply explored across endo-histologic activity and treatment-exposure in ulcerative colitis. METHODS/STUDY POPULATION: Our retrospective cohort was derived from the Study of a Prospective Adult Research Cohort with Inflammatory Bowel Disease. We evaluated the fungal composition of fecal samples from 98 ulcerative colitis patients across endoscopic activity (n=43), endo-histologic activity (n=41), and biologic-exposure (n=98). Across all subgroups, we assessed fungal diversity and differential abundance of specific taxonomic groups. RESULTS/ANTICIPATED RESULTS: We identified 504 unique fungal amplicon sequence variants across the cohort of 98 patients, dominated by phylum Ascomycota. Compared to endoscopic remission, patients with endoscopic activity had an increased global fungus load (p DISCUSSION/SIGNIFICANCE: Endoscopic inflammation in ulcerative colitis is associated with altered fungal diversity driven by expansion of Saccharomyces and Candida compared to remission. The role of these fungal taxa as potential biomarkers and targets for personalized approaches to therapeutics in ulcerative colitis should be evaluated. Cambridge University Press 2023-04-24 /pmc/articles/PMC10129763/ http://dx.doi.org/10.1017/cts.2023.420 Text en © The Association for Clinical and Translational Science 2023 https://creativecommons.org/licenses/by-nc-nd/4.0/This is an Open Access article, distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives licence (https://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is unaltered and is properly cited. The written permission of Cambridge University Press must be obtained for commercial re-use or in order to create a derivative work. |
spellingShingle | Precision Medicine/Health Jangi, Sushrut Hsia, Katie Zhao, Naisi Chung, Mei Algarrahi, Khalid Kouhsari, Laleh Montaser Fu, May Chen, Hannah Singh, Siddharth Michaud, S. 384 Alterations in the fungal microbiome in ulcerative colitis |
title | 384 Alterations in the fungal microbiome in ulcerative colitis |
title_full | 384 Alterations in the fungal microbiome in ulcerative colitis |
title_fullStr | 384 Alterations in the fungal microbiome in ulcerative colitis |
title_full_unstemmed | 384 Alterations in the fungal microbiome in ulcerative colitis |
title_short | 384 Alterations in the fungal microbiome in ulcerative colitis |
title_sort | 384 alterations in the fungal microbiome in ulcerative colitis |
topic | Precision Medicine/Health |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10129763/ http://dx.doi.org/10.1017/cts.2023.420 |
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