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Comprehensive analysis of bZIP transcription factors in passion fruit
The bZIP transcription factors are well-known transcriptional regulators that are essential for regulating resistance to biotic and abiotic stresses in plants. In this study, a total of 56 putative bZIP members were identified in passion fruit (Passiflora edulis). An integrative analysis was perform...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10130921/ https://www.ncbi.nlm.nih.gov/pubmed/37123220 http://dx.doi.org/10.1016/j.isci.2023.106556 |
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author | Ma, Funing Zhou, Hongwu Xu, Yi Huang, Dongmei Wu, Bin Xing, Wenting Chen, Di Xu, Bingqiang Song, Shun |
author_facet | Ma, Funing Zhou, Hongwu Xu, Yi Huang, Dongmei Wu, Bin Xing, Wenting Chen, Di Xu, Bingqiang Song, Shun |
author_sort | Ma, Funing |
collection | PubMed |
description | The bZIP transcription factors are well-known transcriptional regulators that are essential for regulating resistance to biotic and abiotic stresses in plants. In this study, a total of 56 putative bZIP members were identified in passion fruit (Passiflora edulis). An integrative analysis was performed using bioinformatics. Transcriptome analysis revealed that most PebZIPs respond to drought, salt, cold and heat stress. By combining the transcriptome results of two different resistant genotypes, four representative members were finally selected for differential expression validation in different tissues and cultivars. Furthermore, transcriptome and metabolome association analysis revealed consistent expression trends of PeZIP20 and PeZIP21, with only one difference at 63aa, with different metabolites including flavonoids, lipids and amino acids. This work will contribute to further studies of the functions of bZIPs and their resistance properties, as well as to the development of novel germplasm. |
format | Online Article Text |
id | pubmed-10130921 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-101309212023-04-27 Comprehensive analysis of bZIP transcription factors in passion fruit Ma, Funing Zhou, Hongwu Xu, Yi Huang, Dongmei Wu, Bin Xing, Wenting Chen, Di Xu, Bingqiang Song, Shun iScience Article The bZIP transcription factors are well-known transcriptional regulators that are essential for regulating resistance to biotic and abiotic stresses in plants. In this study, a total of 56 putative bZIP members were identified in passion fruit (Passiflora edulis). An integrative analysis was performed using bioinformatics. Transcriptome analysis revealed that most PebZIPs respond to drought, salt, cold and heat stress. By combining the transcriptome results of two different resistant genotypes, four representative members were finally selected for differential expression validation in different tissues and cultivars. Furthermore, transcriptome and metabolome association analysis revealed consistent expression trends of PeZIP20 and PeZIP21, with only one difference at 63aa, with different metabolites including flavonoids, lipids and amino acids. This work will contribute to further studies of the functions of bZIPs and their resistance properties, as well as to the development of novel germplasm. Elsevier 2023-04-01 /pmc/articles/PMC10130921/ /pubmed/37123220 http://dx.doi.org/10.1016/j.isci.2023.106556 Text en © 2023. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Ma, Funing Zhou, Hongwu Xu, Yi Huang, Dongmei Wu, Bin Xing, Wenting Chen, Di Xu, Bingqiang Song, Shun Comprehensive analysis of bZIP transcription factors in passion fruit |
title | Comprehensive analysis of bZIP transcription factors in passion fruit |
title_full | Comprehensive analysis of bZIP transcription factors in passion fruit |
title_fullStr | Comprehensive analysis of bZIP transcription factors in passion fruit |
title_full_unstemmed | Comprehensive analysis of bZIP transcription factors in passion fruit |
title_short | Comprehensive analysis of bZIP transcription factors in passion fruit |
title_sort | comprehensive analysis of bzip transcription factors in passion fruit |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10130921/ https://www.ncbi.nlm.nih.gov/pubmed/37123220 http://dx.doi.org/10.1016/j.isci.2023.106556 |
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