Cargando…

Primary and Secondary micro-RNA Modulation the Extrinsic Pathway of Apoptosis in Hepatocellular Carcinoma

Abstract—One of the most common malignant liver diseases is hepatocellular carcinoma, which has a high recurrence rate and a low five-year survival rate. It is very heterogeneous both in structure and between patients, which complicates the diagnosis, prognosis and response to treatment. In this reg...

Descripción completa

Detalles Bibliográficos
Autores principales: Khlebodarova, T. M., Demenkov, P. S., Ivanisenko, T. V., Antropova, E. A., Lavrik, I. N., Ivanisenko, V. A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pleiades Publishing 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10131518/
https://www.ncbi.nlm.nih.gov/pubmed/37128213
http://dx.doi.org/10.1134/S0026893323020103
_version_ 1785031194360938496
author Khlebodarova, T. M.
Demenkov, P. S.
Ivanisenko, T. V.
Antropova, E. A.
Lavrik, I. N.
Ivanisenko, V. A.
author_facet Khlebodarova, T. M.
Demenkov, P. S.
Ivanisenko, T. V.
Antropova, E. A.
Lavrik, I. N.
Ivanisenko, V. A.
author_sort Khlebodarova, T. M.
collection PubMed
description Abstract—One of the most common malignant liver diseases is hepatocellular carcinoma, which has a high recurrence rate and a low five-year survival rate. It is very heterogeneous both in structure and between patients, which complicates the diagnosis, prognosis and response to treatment. In this regard, an individualized, patient-centered approach becomes important, in which the use of mimetics and hsa-miRNA inhibitors involved in the pathogenesis of the disease may be determinative. From this point of view hsa-miRNAs are of interest, their aberrant expression is associated with poor prognosis for patients and is associated with tumor progression due to dysregulation of programmed cell death (apoptosis). However, the effect of hsa-miRNA on tumor development depends not only on its direct effect on expression of genes, the primary targets, but also on secondary targets mediated by regulatory pathways. While the former are actively studied, the role of secondary targets of these hsa-miRNAs in modulating apoptosis is still unclear. The present work summarizes data on hsa-miRNAs whose primary targets are key genes of the extrinsic pathway of apoptosis. Their aberrant expression is associated with early disease relapse and poor patient outcome. For these hsa-miRNAs, using the software package ANDSystem, we reconstructed the regulation of the expression of secondary targets and analyzed their impact on the activity of the extrinsic pathway of apoptosis. The potential effect of hsa-miRNAs mediated by action on secondary targets is shown to negatively correlate with the number of primary targets. It is also shown that hsa-miR-373, hsa-miR-106b and hsa-miR-96 have the highest priority as markers of hepatocellular carcinoma, whose action on secondary targets enhances their anti-apoptotic effect.
format Online
Article
Text
id pubmed-10131518
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Pleiades Publishing
record_format MEDLINE/PubMed
spelling pubmed-101315182023-04-27 Primary and Secondary micro-RNA Modulation the Extrinsic Pathway of Apoptosis in Hepatocellular Carcinoma Khlebodarova, T. M. Demenkov, P. S. Ivanisenko, T. V. Antropova, E. A. Lavrik, I. N. Ivanisenko, V. A. Mol Biol Bioinformatics and Systems Computer Biology Abstract—One of the most common malignant liver diseases is hepatocellular carcinoma, which has a high recurrence rate and a low five-year survival rate. It is very heterogeneous both in structure and between patients, which complicates the diagnosis, prognosis and response to treatment. In this regard, an individualized, patient-centered approach becomes important, in which the use of mimetics and hsa-miRNA inhibitors involved in the pathogenesis of the disease may be determinative. From this point of view hsa-miRNAs are of interest, their aberrant expression is associated with poor prognosis for patients and is associated with tumor progression due to dysregulation of programmed cell death (apoptosis). However, the effect of hsa-miRNA on tumor development depends not only on its direct effect on expression of genes, the primary targets, but also on secondary targets mediated by regulatory pathways. While the former are actively studied, the role of secondary targets of these hsa-miRNAs in modulating apoptosis is still unclear. The present work summarizes data on hsa-miRNAs whose primary targets are key genes of the extrinsic pathway of apoptosis. Their aberrant expression is associated with early disease relapse and poor patient outcome. For these hsa-miRNAs, using the software package ANDSystem, we reconstructed the regulation of the expression of secondary targets and analyzed their impact on the activity of the extrinsic pathway of apoptosis. The potential effect of hsa-miRNAs mediated by action on secondary targets is shown to negatively correlate with the number of primary targets. It is also shown that hsa-miR-373, hsa-miR-106b and hsa-miR-96 have the highest priority as markers of hepatocellular carcinoma, whose action on secondary targets enhances their anti-apoptotic effect. Pleiades Publishing 2023-04-26 2023 /pmc/articles/PMC10131518/ /pubmed/37128213 http://dx.doi.org/10.1134/S0026893323020103 Text en © Pleiades Publishing, Inc. 2023, ISSN 0026-8933, Molecular Biology, 2023, Vol. 57, No. 2, pp. 165–175. © Pleiades Publishing, Inc., 2023.Russian Text © The Author(s), 2023, published in Molekulyarnaya Biologiya, 2023, Vol. 57, No. 2, pp. 166–177. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Bioinformatics and Systems Computer Biology
Khlebodarova, T. M.
Demenkov, P. S.
Ivanisenko, T. V.
Antropova, E. A.
Lavrik, I. N.
Ivanisenko, V. A.
Primary and Secondary micro-RNA Modulation the Extrinsic Pathway of Apoptosis in Hepatocellular Carcinoma
title Primary and Secondary micro-RNA Modulation the Extrinsic Pathway of Apoptosis in Hepatocellular Carcinoma
title_full Primary and Secondary micro-RNA Modulation the Extrinsic Pathway of Apoptosis in Hepatocellular Carcinoma
title_fullStr Primary and Secondary micro-RNA Modulation the Extrinsic Pathway of Apoptosis in Hepatocellular Carcinoma
title_full_unstemmed Primary and Secondary micro-RNA Modulation the Extrinsic Pathway of Apoptosis in Hepatocellular Carcinoma
title_short Primary and Secondary micro-RNA Modulation the Extrinsic Pathway of Apoptosis in Hepatocellular Carcinoma
title_sort primary and secondary micro-rna modulation the extrinsic pathway of apoptosis in hepatocellular carcinoma
topic Bioinformatics and Systems Computer Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10131518/
https://www.ncbi.nlm.nih.gov/pubmed/37128213
http://dx.doi.org/10.1134/S0026893323020103
work_keys_str_mv AT khlebodarovatm primaryandsecondarymicrornamodulationtheextrinsicpathwayofapoptosisinhepatocellularcarcinoma
AT demenkovps primaryandsecondarymicrornamodulationtheextrinsicpathwayofapoptosisinhepatocellularcarcinoma
AT ivanisenkotv primaryandsecondarymicrornamodulationtheextrinsicpathwayofapoptosisinhepatocellularcarcinoma
AT antropovaea primaryandsecondarymicrornamodulationtheextrinsicpathwayofapoptosisinhepatocellularcarcinoma
AT lavrikin primaryandsecondarymicrornamodulationtheextrinsicpathwayofapoptosisinhepatocellularcarcinoma
AT ivanisenkova primaryandsecondarymicrornamodulationtheextrinsicpathwayofapoptosisinhepatocellularcarcinoma