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Discovery of an Abundant Viral Genus in Polar Regions through the Isolation and Genomic Characterization of a New Virus against Oceanospirillaceae

The marine bacterial family Oceanospirillaceae, is well-known for its ability to degrade hydrocarbons and for its close association with algal blooms. However, only a few Oceanospirillaceae-infecting phages have been reported thus far. Here, we report on a novel Oceanospirillum phage, namely, vB_Osa...

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Autores principales: Zhang, Wenjing, Liu, Yundan, Zheng, Kaiyang, Xing, Jinyan, Li, Qian, Gu, Chengxiang, Wang, Ziyue, Shao, Hongbing, Guo, Cui, He, Hui, Wang, Hualong, Sung, Yeong Yik, Mok, Wen Jye, Wong, Li Lian, Liang, Yantao, McMinn, Andrew, Wang, Min
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10132091/
https://www.ncbi.nlm.nih.gov/pubmed/36975807
http://dx.doi.org/10.1128/aem.01896-22
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author Zhang, Wenjing
Liu, Yundan
Zheng, Kaiyang
Xing, Jinyan
Li, Qian
Gu, Chengxiang
Wang, Ziyue
Shao, Hongbing
Guo, Cui
He, Hui
Wang, Hualong
Sung, Yeong Yik
Mok, Wen Jye
Wong, Li Lian
Liang, Yantao
McMinn, Andrew
Wang, Min
author_facet Zhang, Wenjing
Liu, Yundan
Zheng, Kaiyang
Xing, Jinyan
Li, Qian
Gu, Chengxiang
Wang, Ziyue
Shao, Hongbing
Guo, Cui
He, Hui
Wang, Hualong
Sung, Yeong Yik
Mok, Wen Jye
Wong, Li Lian
Liang, Yantao
McMinn, Andrew
Wang, Min
author_sort Zhang, Wenjing
collection PubMed
description The marine bacterial family Oceanospirillaceae, is well-known for its ability to degrade hydrocarbons and for its close association with algal blooms. However, only a few Oceanospirillaceae-infecting phages have been reported thus far. Here, we report on a novel Oceanospirillum phage, namely, vB_OsaM_PD0307, which has a 44,421 bp linear dsDNA genome and is the first myovirus infecting Oceanospirillaceae. A genomic analysis demonstrated that vB_OsaM_PD0307 is a variant of current phage isolates from the NCBI data set but that it has similar genomic features to two high-quality, uncultured viral genomes identified from marine metagenomes. Hence, we propose that vB_OsaM_PD0307 can be classified as the type phage of a new genus, designated Oceanospimyovirus. Additionally, metagenomic read mapping results have further shown that Oceanospimyovirus species are widespread in the global ocean, display distinct biogeographic distributions, and are abundant in polar regions. In summary, our findings expand the current understanding of the genomic characteristics, phylogenetic diversity, and distribution of Oceanospimyovirus phages. IMPORTANCE Oceanospirillum phage vB_OsaM_PD0307 is the first myovirus found to infect Oceanospirillaceae, and it represents a novel abundant viral genus in polar regions. This study provides insights into the genomic, phylogenetic, and ecological characteristics of the new viral genus, namely Oceanospimyovirus.
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spelling pubmed-101320912023-04-27 Discovery of an Abundant Viral Genus in Polar Regions through the Isolation and Genomic Characterization of a New Virus against Oceanospirillaceae Zhang, Wenjing Liu, Yundan Zheng, Kaiyang Xing, Jinyan Li, Qian Gu, Chengxiang Wang, Ziyue Shao, Hongbing Guo, Cui He, Hui Wang, Hualong Sung, Yeong Yik Mok, Wen Jye Wong, Li Lian Liang, Yantao McMinn, Andrew Wang, Min Appl Environ Microbiol Microbial Ecology The marine bacterial family Oceanospirillaceae, is well-known for its ability to degrade hydrocarbons and for its close association with algal blooms. However, only a few Oceanospirillaceae-infecting phages have been reported thus far. Here, we report on a novel Oceanospirillum phage, namely, vB_OsaM_PD0307, which has a 44,421 bp linear dsDNA genome and is the first myovirus infecting Oceanospirillaceae. A genomic analysis demonstrated that vB_OsaM_PD0307 is a variant of current phage isolates from the NCBI data set but that it has similar genomic features to two high-quality, uncultured viral genomes identified from marine metagenomes. Hence, we propose that vB_OsaM_PD0307 can be classified as the type phage of a new genus, designated Oceanospimyovirus. Additionally, metagenomic read mapping results have further shown that Oceanospimyovirus species are widespread in the global ocean, display distinct biogeographic distributions, and are abundant in polar regions. In summary, our findings expand the current understanding of the genomic characteristics, phylogenetic diversity, and distribution of Oceanospimyovirus phages. IMPORTANCE Oceanospirillum phage vB_OsaM_PD0307 is the first myovirus found to infect Oceanospirillaceae, and it represents a novel abundant viral genus in polar regions. This study provides insights into the genomic, phylogenetic, and ecological characteristics of the new viral genus, namely Oceanospimyovirus. American Society for Microbiology 2023-03-28 /pmc/articles/PMC10132091/ /pubmed/36975807 http://dx.doi.org/10.1128/aem.01896-22 Text en Copyright © 2023 Zhang et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Microbial Ecology
Zhang, Wenjing
Liu, Yundan
Zheng, Kaiyang
Xing, Jinyan
Li, Qian
Gu, Chengxiang
Wang, Ziyue
Shao, Hongbing
Guo, Cui
He, Hui
Wang, Hualong
Sung, Yeong Yik
Mok, Wen Jye
Wong, Li Lian
Liang, Yantao
McMinn, Andrew
Wang, Min
Discovery of an Abundant Viral Genus in Polar Regions through the Isolation and Genomic Characterization of a New Virus against Oceanospirillaceae
title Discovery of an Abundant Viral Genus in Polar Regions through the Isolation and Genomic Characterization of a New Virus against Oceanospirillaceae
title_full Discovery of an Abundant Viral Genus in Polar Regions through the Isolation and Genomic Characterization of a New Virus against Oceanospirillaceae
title_fullStr Discovery of an Abundant Viral Genus in Polar Regions through the Isolation and Genomic Characterization of a New Virus against Oceanospirillaceae
title_full_unstemmed Discovery of an Abundant Viral Genus in Polar Regions through the Isolation and Genomic Characterization of a New Virus against Oceanospirillaceae
title_short Discovery of an Abundant Viral Genus in Polar Regions through the Isolation and Genomic Characterization of a New Virus against Oceanospirillaceae
title_sort discovery of an abundant viral genus in polar regions through the isolation and genomic characterization of a new virus against oceanospirillaceae
topic Microbial Ecology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10132091/
https://www.ncbi.nlm.nih.gov/pubmed/36975807
http://dx.doi.org/10.1128/aem.01896-22
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