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Carbapenemase investigation with rapid phenotypic test (RESIST-4 O.K.N.V) and comparison with PCR in carbapenem-resistant Enterobacterales strains

BACKGROUND AND OBJECTIVES: RESİST-4 O.K.N.V. assay is a lateral immunochromatocraphic test for the identification of oxacillinase (OXA)-48-like, Klebsiella pneumoniae carbapenemase (KPC), New Delhi metallo-β-lactamase (NDM), and Verona integron-encoded metallo-β-lactamase (VIM) producing strains. It...

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Autores principales: Yaşar-Duman, Melike, Çilli, Feriha, Tekintaş, Yamaç, Polat, Furkan, Hoşgör-Limoncu, Mine
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Tehran University of Medical Sciences 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10132333/
https://www.ncbi.nlm.nih.gov/pubmed/37124854
http://dx.doi.org/10.18502/ijm.v14i3.9769
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author Yaşar-Duman, Melike
Çilli, Feriha
Tekintaş, Yamaç
Polat, Furkan
Hoşgör-Limoncu, Mine
author_facet Yaşar-Duman, Melike
Çilli, Feriha
Tekintaş, Yamaç
Polat, Furkan
Hoşgör-Limoncu, Mine
author_sort Yaşar-Duman, Melike
collection PubMed
description BACKGROUND AND OBJECTIVES: RESİST-4 O.K.N.V. assay is a lateral immunochromatocraphic test for the identification of oxacillinase (OXA)-48-like, Klebsiella pneumoniae carbapenemase (KPC), New Delhi metallo-β-lactamase (NDM), and Verona integron-encoded metallo-β-lactamase (VIM) producing strains. It was aimed to evaluate the performance of the RESIST-4 O.K.N.V. test and to compare it with the reference method polymerase chain reaction (PCR). Also, the objective was to determine the distribution of carbapenemase types of CRE strains isolated in our hospital. MATERIALS AND METHODS: Between January 2016–October 2019, 187 strains isolated from clinical samples were included in this study. Bacterial identification was done using MALDI-TOF MS. Antibiotic susceptibility tests were studied with the VITEK-2 automated system. Meropenem minimum inhibitory concentrations (MICs) were determined by the gradient test. All strains were studied with the RESIST-4 O.K.N.V. test and then the strains were selected for the PCR test. bla (OXA-48), bla(NDM), bla(KPC), and bla(VIM) were investigated with PCR. K. pneumoniae NCTC® 13438 (KWIKSTIKTM, Microbiologics®, USA) was used as the positive control, E. coli ATTC® 25922 TM (Microbiologics®, USA) and three carbapenem-sensitive clinical isolates were also used as the negative control. RESULTS: Meropenem MIC(50) and MIC(90) values were determined to be >32 mg/L. With PCR bla(OXA-48), bla(NDM), bla(KPC) and bla(VIM) were detected in 79, 63, 20, and 4 strains, respectively. bla(OXA-48) and bla (NDM) were found together in 51 of the isolates. bla (OXA-48), bla (NDM), bla (KPC), and bla(VIM) were not detected in two strains with carbapenem resistance in susceptibility tests. The sensitivity of the immunochromatographic test was 100% for OXA-48, KPC, and VIM but 84.1% for NDM. Specificity was determined as 100% for OXA-48, NDM, KPC, and VIM. CONCLUSION: RESIST-4 O.K.N.V. test showed high sensitivity and specificity in detecting OXA-48, KPC, NDM, and VIM type carbapenemases. However, it should be kept in mind that there may be false-negative results related to NDM.
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spelling pubmed-101323332023-04-27 Carbapenemase investigation with rapid phenotypic test (RESIST-4 O.K.N.V) and comparison with PCR in carbapenem-resistant Enterobacterales strains Yaşar-Duman, Melike Çilli, Feriha Tekintaş, Yamaç Polat, Furkan Hoşgör-Limoncu, Mine Iran J Microbiol Original Article BACKGROUND AND OBJECTIVES: RESİST-4 O.K.N.V. assay is a lateral immunochromatocraphic test for the identification of oxacillinase (OXA)-48-like, Klebsiella pneumoniae carbapenemase (KPC), New Delhi metallo-β-lactamase (NDM), and Verona integron-encoded metallo-β-lactamase (VIM) producing strains. It was aimed to evaluate the performance of the RESIST-4 O.K.N.V. test and to compare it with the reference method polymerase chain reaction (PCR). Also, the objective was to determine the distribution of carbapenemase types of CRE strains isolated in our hospital. MATERIALS AND METHODS: Between January 2016–October 2019, 187 strains isolated from clinical samples were included in this study. Bacterial identification was done using MALDI-TOF MS. Antibiotic susceptibility tests were studied with the VITEK-2 automated system. Meropenem minimum inhibitory concentrations (MICs) were determined by the gradient test. All strains were studied with the RESIST-4 O.K.N.V. test and then the strains were selected for the PCR test. bla (OXA-48), bla(NDM), bla(KPC), and bla(VIM) were investigated with PCR. K. pneumoniae NCTC® 13438 (KWIKSTIKTM, Microbiologics®, USA) was used as the positive control, E. coli ATTC® 25922 TM (Microbiologics®, USA) and three carbapenem-sensitive clinical isolates were also used as the negative control. RESULTS: Meropenem MIC(50) and MIC(90) values were determined to be >32 mg/L. With PCR bla(OXA-48), bla(NDM), bla(KPC) and bla(VIM) were detected in 79, 63, 20, and 4 strains, respectively. bla(OXA-48) and bla (NDM) were found together in 51 of the isolates. bla (OXA-48), bla (NDM), bla (KPC), and bla(VIM) were not detected in two strains with carbapenem resistance in susceptibility tests. The sensitivity of the immunochromatographic test was 100% for OXA-48, KPC, and VIM but 84.1% for NDM. Specificity was determined as 100% for OXA-48, NDM, KPC, and VIM. CONCLUSION: RESIST-4 O.K.N.V. test showed high sensitivity and specificity in detecting OXA-48, KPC, NDM, and VIM type carbapenemases. However, it should be kept in mind that there may be false-negative results related to NDM. Tehran University of Medical Sciences 2022-06 /pmc/articles/PMC10132333/ /pubmed/37124854 http://dx.doi.org/10.18502/ijm.v14i3.9769 Text en Copyright © 2022 The Authors. Published by Tehran University of Medical Sciences https://creativecommons.org/licenses/by-nc/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International license (https://creativecommons.org/licenses/by-nc/4.0/). Non-commercial uses of the work are permitted, provided the original work is properly cited.
spellingShingle Original Article
Yaşar-Duman, Melike
Çilli, Feriha
Tekintaş, Yamaç
Polat, Furkan
Hoşgör-Limoncu, Mine
Carbapenemase investigation with rapid phenotypic test (RESIST-4 O.K.N.V) and comparison with PCR in carbapenem-resistant Enterobacterales strains
title Carbapenemase investigation with rapid phenotypic test (RESIST-4 O.K.N.V) and comparison with PCR in carbapenem-resistant Enterobacterales strains
title_full Carbapenemase investigation with rapid phenotypic test (RESIST-4 O.K.N.V) and comparison with PCR in carbapenem-resistant Enterobacterales strains
title_fullStr Carbapenemase investigation with rapid phenotypic test (RESIST-4 O.K.N.V) and comparison with PCR in carbapenem-resistant Enterobacterales strains
title_full_unstemmed Carbapenemase investigation with rapid phenotypic test (RESIST-4 O.K.N.V) and comparison with PCR in carbapenem-resistant Enterobacterales strains
title_short Carbapenemase investigation with rapid phenotypic test (RESIST-4 O.K.N.V) and comparison with PCR in carbapenem-resistant Enterobacterales strains
title_sort carbapenemase investigation with rapid phenotypic test (resist-4 o.k.n.v) and comparison with pcr in carbapenem-resistant enterobacterales strains
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10132333/
https://www.ncbi.nlm.nih.gov/pubmed/37124854
http://dx.doi.org/10.18502/ijm.v14i3.9769
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