Cargando…

Unraveling the Mechanism of Immunity and Inflammation Related to Molecular Signatures Crosstalk Among Obesity, T2D, and AD: Insights From Bioinformatics Approaches

Individuals with type 2 diabetes (T2D) and obesity have a higher risk of developing Alzheimer disease (AD), and increasing evidence indicates a link between impaired immune signaling pathways and the development of AD. However, the shared cellular mechanisms and molecular signatures among these 3 di...

Descripción completa

Detalles Bibliográficos
Autores principales: Vishal, Kumar, Bhuiyan, Piplu, Qi, Junxia, Chen, Yang, Zhang, Jubiao, Yang, Fen, Li, Juxue
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10134115/
https://www.ncbi.nlm.nih.gov/pubmed/37124128
http://dx.doi.org/10.1177/11779322231167977
_version_ 1785031688890351616
author Vishal, Kumar
Bhuiyan, Piplu
Qi, Junxia
Chen, Yang
Zhang, Jubiao
Yang, Fen
Li, Juxue
author_facet Vishal, Kumar
Bhuiyan, Piplu
Qi, Junxia
Chen, Yang
Zhang, Jubiao
Yang, Fen
Li, Juxue
author_sort Vishal, Kumar
collection PubMed
description Individuals with type 2 diabetes (T2D) and obesity have a higher risk of developing Alzheimer disease (AD), and increasing evidence indicates a link between impaired immune signaling pathways and the development of AD. However, the shared cellular mechanisms and molecular signatures among these 3 diseases remain unknown. The purpose of this study was to uncover similar molecular markers and pathways involved in obesity, T2D, and AD using bioinformatics and a network biology approach. First, we investigated the 3 RNA sequencing (RNA-seq) gene expression data sets and determined 224 commonly shared differentially expressed genes (DEGs) from obesity, T2D, and AD diseases. Gene ontology and pathway enrichment analyses revealed that mutual DEGs were mainly enriched with immune and inflammatory signaling pathways. In addition, we constructed a protein-protein interactions network for finding hub genes, which have not previously been identified as playing a critical role in these 3 diseases. Furthermore, the transcriptional factors and protein kinases regulating commonly shared DEGs among obesity, T2D, and AD were also identified. Finally, we suggested potential drug candidates as possible therapeutic interventions for 3 diseases. The results of this bioinformatics analysis provided a new understanding of the potential links between obesity, T2D, and AD pathologies.
format Online
Article
Text
id pubmed-10134115
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher SAGE Publications
record_format MEDLINE/PubMed
spelling pubmed-101341152023-04-28 Unraveling the Mechanism of Immunity and Inflammation Related to Molecular Signatures Crosstalk Among Obesity, T2D, and AD: Insights From Bioinformatics Approaches Vishal, Kumar Bhuiyan, Piplu Qi, Junxia Chen, Yang Zhang, Jubiao Yang, Fen Li, Juxue Bioinform Biol Insights Original Research Article Individuals with type 2 diabetes (T2D) and obesity have a higher risk of developing Alzheimer disease (AD), and increasing evidence indicates a link between impaired immune signaling pathways and the development of AD. However, the shared cellular mechanisms and molecular signatures among these 3 diseases remain unknown. The purpose of this study was to uncover similar molecular markers and pathways involved in obesity, T2D, and AD using bioinformatics and a network biology approach. First, we investigated the 3 RNA sequencing (RNA-seq) gene expression data sets and determined 224 commonly shared differentially expressed genes (DEGs) from obesity, T2D, and AD diseases. Gene ontology and pathway enrichment analyses revealed that mutual DEGs were mainly enriched with immune and inflammatory signaling pathways. In addition, we constructed a protein-protein interactions network for finding hub genes, which have not previously been identified as playing a critical role in these 3 diseases. Furthermore, the transcriptional factors and protein kinases regulating commonly shared DEGs among obesity, T2D, and AD were also identified. Finally, we suggested potential drug candidates as possible therapeutic interventions for 3 diseases. The results of this bioinformatics analysis provided a new understanding of the potential links between obesity, T2D, and AD pathologies. SAGE Publications 2023-04-25 /pmc/articles/PMC10134115/ /pubmed/37124128 http://dx.doi.org/10.1177/11779322231167977 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access page (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Original Research Article
Vishal, Kumar
Bhuiyan, Piplu
Qi, Junxia
Chen, Yang
Zhang, Jubiao
Yang, Fen
Li, Juxue
Unraveling the Mechanism of Immunity and Inflammation Related to Molecular Signatures Crosstalk Among Obesity, T2D, and AD: Insights From Bioinformatics Approaches
title Unraveling the Mechanism of Immunity and Inflammation Related to Molecular Signatures Crosstalk Among Obesity, T2D, and AD: Insights From Bioinformatics Approaches
title_full Unraveling the Mechanism of Immunity and Inflammation Related to Molecular Signatures Crosstalk Among Obesity, T2D, and AD: Insights From Bioinformatics Approaches
title_fullStr Unraveling the Mechanism of Immunity and Inflammation Related to Molecular Signatures Crosstalk Among Obesity, T2D, and AD: Insights From Bioinformatics Approaches
title_full_unstemmed Unraveling the Mechanism of Immunity and Inflammation Related to Molecular Signatures Crosstalk Among Obesity, T2D, and AD: Insights From Bioinformatics Approaches
title_short Unraveling the Mechanism of Immunity and Inflammation Related to Molecular Signatures Crosstalk Among Obesity, T2D, and AD: Insights From Bioinformatics Approaches
title_sort unraveling the mechanism of immunity and inflammation related to molecular signatures crosstalk among obesity, t2d, and ad: insights from bioinformatics approaches
topic Original Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10134115/
https://www.ncbi.nlm.nih.gov/pubmed/37124128
http://dx.doi.org/10.1177/11779322231167977
work_keys_str_mv AT vishalkumar unravelingthemechanismofimmunityandinflammationrelatedtomolecularsignaturescrosstalkamongobesityt2dandadinsightsfrombioinformaticsapproaches
AT bhuiyanpiplu unravelingthemechanismofimmunityandinflammationrelatedtomolecularsignaturescrosstalkamongobesityt2dandadinsightsfrombioinformaticsapproaches
AT qijunxia unravelingthemechanismofimmunityandinflammationrelatedtomolecularsignaturescrosstalkamongobesityt2dandadinsightsfrombioinformaticsapproaches
AT chenyang unravelingthemechanismofimmunityandinflammationrelatedtomolecularsignaturescrosstalkamongobesityt2dandadinsightsfrombioinformaticsapproaches
AT zhangjubiao unravelingthemechanismofimmunityandinflammationrelatedtomolecularsignaturescrosstalkamongobesityt2dandadinsightsfrombioinformaticsapproaches
AT yangfen unravelingthemechanismofimmunityandinflammationrelatedtomolecularsignaturescrosstalkamongobesityt2dandadinsightsfrombioinformaticsapproaches
AT lijuxue unravelingthemechanismofimmunityandinflammationrelatedtomolecularsignaturescrosstalkamongobesityt2dandadinsightsfrombioinformaticsapproaches