Cargando…

A proof-of-concept pipeline to guide evaluation of tumor tissue perfusion by dynamic contrast-agent imaging: Direct simulation and inverse tracer-kinetic procedures

Dynamic contrast-enhanced (DCE) perfusion imaging has shown great potential to non-invasively assess cancer development and its treatment by their characteristic tissue signatures. Different tracer kinetics models are being applied to estimate tissue and tumor perfusion parameters from DCE perfusion...

Descripción completa

Detalles Bibliográficos
Autores principales: Vignon-Clementel, Irene E., Jagiella, Nick, Dichamp, Jules, Kowalski, Jérôme, Lederle, Wiltrud, Laue, Hendrik, Kiessling, Fabian, Sedlaczek, Oliver, Drasdo, Dirk
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10135870/
https://www.ncbi.nlm.nih.gov/pubmed/37122998
http://dx.doi.org/10.3389/fbinf.2023.977228
_version_ 1785032083885785088
author Vignon-Clementel, Irene E.
Jagiella, Nick
Dichamp, Jules
Kowalski, Jérôme
Lederle, Wiltrud
Laue, Hendrik
Kiessling, Fabian
Sedlaczek, Oliver
Drasdo, Dirk
author_facet Vignon-Clementel, Irene E.
Jagiella, Nick
Dichamp, Jules
Kowalski, Jérôme
Lederle, Wiltrud
Laue, Hendrik
Kiessling, Fabian
Sedlaczek, Oliver
Drasdo, Dirk
author_sort Vignon-Clementel, Irene E.
collection PubMed
description Dynamic contrast-enhanced (DCE) perfusion imaging has shown great potential to non-invasively assess cancer development and its treatment by their characteristic tissue signatures. Different tracer kinetics models are being applied to estimate tissue and tumor perfusion parameters from DCE perfusion imaging. The goal of this work is to provide an in silico model-based pipeline to evaluate how these DCE imaging parameters may relate to the true tissue parameters. As histology data provides detailed microstructural but not functional parameters, this work can also help to better interpret such data. To this aim in silico vasculatures are constructed and the spread of contrast agent in the tissue is simulated. As a proof of principle we show the evaluation procedure of two tracer kinetic models from in silico contrast-agent perfusion data after a bolus injection. Representative microvascular arterial and venous trees are constructed in silico. Blood flow is computed in the different vessels. Contrast-agent input in the feeding artery, intra-vascular transport, intra-extravascular exchange and diffusion within the interstitial space are modeled. From this spatiotemporal model, intensity maps are computed leading to in silico dynamic perfusion images. Various tumor vascularizations (architecture and function) are studied and show spatiotemporal contrast imaging dynamics characteristic of in vivo tumor morphotypes. The Brix II also called 2CXM, and extended Tofts tracer-kinetics models common in DCE imaging are then applied to recover perfusion parameters that are compared with the ground truth parameters of the in silico spatiotemporal models. The results show that tumor features can be well identified for a certain permeability range. The simulation results in this work indicate that taking into account space explicitly to estimate perfusion parameters may lead to significant improvements in the perfusion interpretation of the current tracer-kinetics models.
format Online
Article
Text
id pubmed-10135870
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-101358702023-04-28 A proof-of-concept pipeline to guide evaluation of tumor tissue perfusion by dynamic contrast-agent imaging: Direct simulation and inverse tracer-kinetic procedures Vignon-Clementel, Irene E. Jagiella, Nick Dichamp, Jules Kowalski, Jérôme Lederle, Wiltrud Laue, Hendrik Kiessling, Fabian Sedlaczek, Oliver Drasdo, Dirk Front Bioinform Bioinformatics Dynamic contrast-enhanced (DCE) perfusion imaging has shown great potential to non-invasively assess cancer development and its treatment by their characteristic tissue signatures. Different tracer kinetics models are being applied to estimate tissue and tumor perfusion parameters from DCE perfusion imaging. The goal of this work is to provide an in silico model-based pipeline to evaluate how these DCE imaging parameters may relate to the true tissue parameters. As histology data provides detailed microstructural but not functional parameters, this work can also help to better interpret such data. To this aim in silico vasculatures are constructed and the spread of contrast agent in the tissue is simulated. As a proof of principle we show the evaluation procedure of two tracer kinetic models from in silico contrast-agent perfusion data after a bolus injection. Representative microvascular arterial and venous trees are constructed in silico. Blood flow is computed in the different vessels. Contrast-agent input in the feeding artery, intra-vascular transport, intra-extravascular exchange and diffusion within the interstitial space are modeled. From this spatiotemporal model, intensity maps are computed leading to in silico dynamic perfusion images. Various tumor vascularizations (architecture and function) are studied and show spatiotemporal contrast imaging dynamics characteristic of in vivo tumor morphotypes. The Brix II also called 2CXM, and extended Tofts tracer-kinetics models common in DCE imaging are then applied to recover perfusion parameters that are compared with the ground truth parameters of the in silico spatiotemporal models. The results show that tumor features can be well identified for a certain permeability range. The simulation results in this work indicate that taking into account space explicitly to estimate perfusion parameters may lead to significant improvements in the perfusion interpretation of the current tracer-kinetics models. Frontiers Media S.A. 2023-04-13 /pmc/articles/PMC10135870/ /pubmed/37122998 http://dx.doi.org/10.3389/fbinf.2023.977228 Text en Copyright © 2023 Vignon-Clementel, Jagiella, Dichamp, Kowalski, Lederle, Laue, Kiessling, Sedlaczek and Drasdo. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Bioinformatics
Vignon-Clementel, Irene E.
Jagiella, Nick
Dichamp, Jules
Kowalski, Jérôme
Lederle, Wiltrud
Laue, Hendrik
Kiessling, Fabian
Sedlaczek, Oliver
Drasdo, Dirk
A proof-of-concept pipeline to guide evaluation of tumor tissue perfusion by dynamic contrast-agent imaging: Direct simulation and inverse tracer-kinetic procedures
title A proof-of-concept pipeline to guide evaluation of tumor tissue perfusion by dynamic contrast-agent imaging: Direct simulation and inverse tracer-kinetic procedures
title_full A proof-of-concept pipeline to guide evaluation of tumor tissue perfusion by dynamic contrast-agent imaging: Direct simulation and inverse tracer-kinetic procedures
title_fullStr A proof-of-concept pipeline to guide evaluation of tumor tissue perfusion by dynamic contrast-agent imaging: Direct simulation and inverse tracer-kinetic procedures
title_full_unstemmed A proof-of-concept pipeline to guide evaluation of tumor tissue perfusion by dynamic contrast-agent imaging: Direct simulation and inverse tracer-kinetic procedures
title_short A proof-of-concept pipeline to guide evaluation of tumor tissue perfusion by dynamic contrast-agent imaging: Direct simulation and inverse tracer-kinetic procedures
title_sort proof-of-concept pipeline to guide evaluation of tumor tissue perfusion by dynamic contrast-agent imaging: direct simulation and inverse tracer-kinetic procedures
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10135870/
https://www.ncbi.nlm.nih.gov/pubmed/37122998
http://dx.doi.org/10.3389/fbinf.2023.977228
work_keys_str_mv AT vignonclementelirenee aproofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT jagiellanick aproofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT dichampjules aproofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT kowalskijerome aproofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT lederlewiltrud aproofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT lauehendrik aproofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT kiesslingfabian aproofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT sedlaczekoliver aproofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT drasdodirk aproofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT vignonclementelirenee proofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT jagiellanick proofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT dichampjules proofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT kowalskijerome proofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT lederlewiltrud proofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT lauehendrik proofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT kiesslingfabian proofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT sedlaczekoliver proofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures
AT drasdodirk proofofconceptpipelinetoguideevaluationoftumortissueperfusionbydynamiccontrastagentimagingdirectsimulationandinversetracerkineticprocedures