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How Well Can We Infer Selection Benefits and Mutation Rates from Allele Frequencies?
Experimentalists observe allele frequency distributions and try to infer mutation rates and selection coefficients. How easy is this? We calculate limits to their ability in the context of the Wright-Fisher model by first finding the maximal amount of information that can be acquired using allele fr...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137336/ https://www.ncbi.nlm.nih.gov/pubmed/37190403 http://dx.doi.org/10.3390/e25040615 |
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author | Soriano, Jonathan Marzen, Sarah |
author_facet | Soriano, Jonathan Marzen, Sarah |
author_sort | Soriano, Jonathan |
collection | PubMed |
description | Experimentalists observe allele frequency distributions and try to infer mutation rates and selection coefficients. How easy is this? We calculate limits to their ability in the context of the Wright-Fisher model by first finding the maximal amount of information that can be acquired using allele frequencies about the mutation rate and selection coefficient– at least 2 bits per allele– and then by finding how the organisms would have shaped their mutation rates and selection coefficients so as to maximize the information transfer. |
format | Online Article Text |
id | pubmed-10137336 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-101373362023-04-28 How Well Can We Infer Selection Benefits and Mutation Rates from Allele Frequencies? Soriano, Jonathan Marzen, Sarah Entropy (Basel) Article Experimentalists observe allele frequency distributions and try to infer mutation rates and selection coefficients. How easy is this? We calculate limits to their ability in the context of the Wright-Fisher model by first finding the maximal amount of information that can be acquired using allele frequencies about the mutation rate and selection coefficient– at least 2 bits per allele– and then by finding how the organisms would have shaped their mutation rates and selection coefficients so as to maximize the information transfer. MDPI 2023-04-04 /pmc/articles/PMC10137336/ /pubmed/37190403 http://dx.doi.org/10.3390/e25040615 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Soriano, Jonathan Marzen, Sarah How Well Can We Infer Selection Benefits and Mutation Rates from Allele Frequencies? |
title | How Well Can We Infer Selection Benefits and Mutation Rates from Allele Frequencies? |
title_full | How Well Can We Infer Selection Benefits and Mutation Rates from Allele Frequencies? |
title_fullStr | How Well Can We Infer Selection Benefits and Mutation Rates from Allele Frequencies? |
title_full_unstemmed | How Well Can We Infer Selection Benefits and Mutation Rates from Allele Frequencies? |
title_short | How Well Can We Infer Selection Benefits and Mutation Rates from Allele Frequencies? |
title_sort | how well can we infer selection benefits and mutation rates from allele frequencies? |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137336/ https://www.ncbi.nlm.nih.gov/pubmed/37190403 http://dx.doi.org/10.3390/e25040615 |
work_keys_str_mv | AT sorianojonathan howwellcanweinferselectionbenefitsandmutationratesfromallelefrequencies AT marzensarah howwellcanweinferselectionbenefitsandmutationratesfromallelefrequencies |