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Cell Decision Making through the Lens of Bayesian Learning

Cell decision making refers to the process by which cells gather information from their local microenvironment and regulate their internal states to create appropriate responses. Microenvironmental cell sensing plays a key role in this process. Our hypothesis is that cell decision-making regulation...

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Detalles Bibliográficos
Autores principales: Barua, Arnab, Hatzikirou, Haralampos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137733/
https://www.ncbi.nlm.nih.gov/pubmed/37190396
http://dx.doi.org/10.3390/e25040609
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author Barua, Arnab
Hatzikirou, Haralampos
author_facet Barua, Arnab
Hatzikirou, Haralampos
author_sort Barua, Arnab
collection PubMed
description Cell decision making refers to the process by which cells gather information from their local microenvironment and regulate their internal states to create appropriate responses. Microenvironmental cell sensing plays a key role in this process. Our hypothesis is that cell decision-making regulation is dictated by Bayesian learning. In this article, we explore the implications of this hypothesis for internal state temporal evolution. By using a timescale separation between internal and external variables on the mesoscopic scale, we derive a hierarchical Fokker–Planck equation for cell-microenvironment dynamics. By combining this with the Bayesian learning hypothesis, we find that changes in microenvironmental entropy dominate the cell state probability distribution. Finally, we use these ideas to understand how cell sensing impacts cell decision making. Notably, our formalism allows us to understand cell state dynamics even without exact biochemical information about cell sensing processes by considering a few key parameters.
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spelling pubmed-101377332023-04-28 Cell Decision Making through the Lens of Bayesian Learning Barua, Arnab Hatzikirou, Haralampos Entropy (Basel) Article Cell decision making refers to the process by which cells gather information from their local microenvironment and regulate their internal states to create appropriate responses. Microenvironmental cell sensing plays a key role in this process. Our hypothesis is that cell decision-making regulation is dictated by Bayesian learning. In this article, we explore the implications of this hypothesis for internal state temporal evolution. By using a timescale separation between internal and external variables on the mesoscopic scale, we derive a hierarchical Fokker–Planck equation for cell-microenvironment dynamics. By combining this with the Bayesian learning hypothesis, we find that changes in microenvironmental entropy dominate the cell state probability distribution. Finally, we use these ideas to understand how cell sensing impacts cell decision making. Notably, our formalism allows us to understand cell state dynamics even without exact biochemical information about cell sensing processes by considering a few key parameters. MDPI 2023-04-03 /pmc/articles/PMC10137733/ /pubmed/37190396 http://dx.doi.org/10.3390/e25040609 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Barua, Arnab
Hatzikirou, Haralampos
Cell Decision Making through the Lens of Bayesian Learning
title Cell Decision Making through the Lens of Bayesian Learning
title_full Cell Decision Making through the Lens of Bayesian Learning
title_fullStr Cell Decision Making through the Lens of Bayesian Learning
title_full_unstemmed Cell Decision Making through the Lens of Bayesian Learning
title_short Cell Decision Making through the Lens of Bayesian Learning
title_sort cell decision making through the lens of bayesian learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137733/
https://www.ncbi.nlm.nih.gov/pubmed/37190396
http://dx.doi.org/10.3390/e25040609
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