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Cell Decision Making through the Lens of Bayesian Learning
Cell decision making refers to the process by which cells gather information from their local microenvironment and regulate their internal states to create appropriate responses. Microenvironmental cell sensing plays a key role in this process. Our hypothesis is that cell decision-making regulation...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137733/ https://www.ncbi.nlm.nih.gov/pubmed/37190396 http://dx.doi.org/10.3390/e25040609 |
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author | Barua, Arnab Hatzikirou, Haralampos |
author_facet | Barua, Arnab Hatzikirou, Haralampos |
author_sort | Barua, Arnab |
collection | PubMed |
description | Cell decision making refers to the process by which cells gather information from their local microenvironment and regulate their internal states to create appropriate responses. Microenvironmental cell sensing plays a key role in this process. Our hypothesis is that cell decision-making regulation is dictated by Bayesian learning. In this article, we explore the implications of this hypothesis for internal state temporal evolution. By using a timescale separation between internal and external variables on the mesoscopic scale, we derive a hierarchical Fokker–Planck equation for cell-microenvironment dynamics. By combining this with the Bayesian learning hypothesis, we find that changes in microenvironmental entropy dominate the cell state probability distribution. Finally, we use these ideas to understand how cell sensing impacts cell decision making. Notably, our formalism allows us to understand cell state dynamics even without exact biochemical information about cell sensing processes by considering a few key parameters. |
format | Online Article Text |
id | pubmed-10137733 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-101377332023-04-28 Cell Decision Making through the Lens of Bayesian Learning Barua, Arnab Hatzikirou, Haralampos Entropy (Basel) Article Cell decision making refers to the process by which cells gather information from their local microenvironment and regulate their internal states to create appropriate responses. Microenvironmental cell sensing plays a key role in this process. Our hypothesis is that cell decision-making regulation is dictated by Bayesian learning. In this article, we explore the implications of this hypothesis for internal state temporal evolution. By using a timescale separation between internal and external variables on the mesoscopic scale, we derive a hierarchical Fokker–Planck equation for cell-microenvironment dynamics. By combining this with the Bayesian learning hypothesis, we find that changes in microenvironmental entropy dominate the cell state probability distribution. Finally, we use these ideas to understand how cell sensing impacts cell decision making. Notably, our formalism allows us to understand cell state dynamics even without exact biochemical information about cell sensing processes by considering a few key parameters. MDPI 2023-04-03 /pmc/articles/PMC10137733/ /pubmed/37190396 http://dx.doi.org/10.3390/e25040609 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Barua, Arnab Hatzikirou, Haralampos Cell Decision Making through the Lens of Bayesian Learning |
title | Cell Decision Making through the Lens of Bayesian Learning |
title_full | Cell Decision Making through the Lens of Bayesian Learning |
title_fullStr | Cell Decision Making through the Lens of Bayesian Learning |
title_full_unstemmed | Cell Decision Making through the Lens of Bayesian Learning |
title_short | Cell Decision Making through the Lens of Bayesian Learning |
title_sort | cell decision making through the lens of bayesian learning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137733/ https://www.ncbi.nlm.nih.gov/pubmed/37190396 http://dx.doi.org/10.3390/e25040609 |
work_keys_str_mv | AT baruaarnab celldecisionmakingthroughthelensofbayesianlearning AT hatzikirouharalampos celldecisionmakingthroughthelensofbayesianlearning |