Cargando…
Pilot Study for the Assessment of the Best Radiomic Features for Bosniak Cyst Classification Using Phantom and Radiologist Inter-Observer Selection
Since the Bosniak cysts classification is highly reader-dependent, automated tools based on radiomics could help in the diagnosis of the lesion. This study is an initial step in the search for radiomic features that may be good classifiers of benign–malignant Bosniak cysts in machine learning models...
Autores principales: | , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137782/ https://www.ncbi.nlm.nih.gov/pubmed/37189486 http://dx.doi.org/10.3390/diagnostics13081384 |
_version_ | 1785032549782781952 |
---|---|
author | Aymerich, María Riveira-Martín, Mercedes García-Baizán, Alejandra González-Pena, Mariña Sebastià, Carmen López-Medina, Antonio Mesa-Álvarez, Alicia Tardágila de la Fuente, Gonzalo Méndez-Castrillón, Marta Berbel-Rodríguez, Andrea Matos-Ugas, Alejandra C. Berenguer, Roberto Sabater, Sebastià Otero-García, Milagros |
author_facet | Aymerich, María Riveira-Martín, Mercedes García-Baizán, Alejandra González-Pena, Mariña Sebastià, Carmen López-Medina, Antonio Mesa-Álvarez, Alicia Tardágila de la Fuente, Gonzalo Méndez-Castrillón, Marta Berbel-Rodríguez, Andrea Matos-Ugas, Alejandra C. Berenguer, Roberto Sabater, Sebastià Otero-García, Milagros |
author_sort | Aymerich, María |
collection | PubMed |
description | Since the Bosniak cysts classification is highly reader-dependent, automated tools based on radiomics could help in the diagnosis of the lesion. This study is an initial step in the search for radiomic features that may be good classifiers of benign–malignant Bosniak cysts in machine learning models. A CCR phantom was used through five CT scanners. Registration was performed with ARIA software, while Quibim Precision was used for feature extraction. R software was used for the statistical analysis. Robust radiomic features based on repeatability and reproducibility criteria were chosen. Excellent correlation criteria between different radiologists during lesion segmentation were imposed. With the selected features, their classification ability in benignity–malignity terms was assessed. From the phantom study, 25.3% of the features were robust. For the study of inter-observer correlation (ICC) in the segmentation of cystic masses, 82 subjects were prospectively selected, finding 48.4% of the features as excellent regarding concordance. Comparing both datasets, 12 features were established as repeatable, reproducible, and useful for the classification of Bosniak cysts and could serve as initial candidates for the elaboration of a classification model. With those features, the Linear Discriminant Analysis model classified the Bosniak cysts in terms of benignity or malignancy with 88.2% accuracy. |
format | Online Article Text |
id | pubmed-10137782 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-101377822023-04-28 Pilot Study for the Assessment of the Best Radiomic Features for Bosniak Cyst Classification Using Phantom and Radiologist Inter-Observer Selection Aymerich, María Riveira-Martín, Mercedes García-Baizán, Alejandra González-Pena, Mariña Sebastià, Carmen López-Medina, Antonio Mesa-Álvarez, Alicia Tardágila de la Fuente, Gonzalo Méndez-Castrillón, Marta Berbel-Rodríguez, Andrea Matos-Ugas, Alejandra C. Berenguer, Roberto Sabater, Sebastià Otero-García, Milagros Diagnostics (Basel) Article Since the Bosniak cysts classification is highly reader-dependent, automated tools based on radiomics could help in the diagnosis of the lesion. This study is an initial step in the search for radiomic features that may be good classifiers of benign–malignant Bosniak cysts in machine learning models. A CCR phantom was used through five CT scanners. Registration was performed with ARIA software, while Quibim Precision was used for feature extraction. R software was used for the statistical analysis. Robust radiomic features based on repeatability and reproducibility criteria were chosen. Excellent correlation criteria between different radiologists during lesion segmentation were imposed. With the selected features, their classification ability in benignity–malignity terms was assessed. From the phantom study, 25.3% of the features were robust. For the study of inter-observer correlation (ICC) in the segmentation of cystic masses, 82 subjects were prospectively selected, finding 48.4% of the features as excellent regarding concordance. Comparing both datasets, 12 features were established as repeatable, reproducible, and useful for the classification of Bosniak cysts and could serve as initial candidates for the elaboration of a classification model. With those features, the Linear Discriminant Analysis model classified the Bosniak cysts in terms of benignity or malignancy with 88.2% accuracy. MDPI 2023-04-10 /pmc/articles/PMC10137782/ /pubmed/37189486 http://dx.doi.org/10.3390/diagnostics13081384 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Aymerich, María Riveira-Martín, Mercedes García-Baizán, Alejandra González-Pena, Mariña Sebastià, Carmen López-Medina, Antonio Mesa-Álvarez, Alicia Tardágila de la Fuente, Gonzalo Méndez-Castrillón, Marta Berbel-Rodríguez, Andrea Matos-Ugas, Alejandra C. Berenguer, Roberto Sabater, Sebastià Otero-García, Milagros Pilot Study for the Assessment of the Best Radiomic Features for Bosniak Cyst Classification Using Phantom and Radiologist Inter-Observer Selection |
title | Pilot Study for the Assessment of the Best Radiomic Features for Bosniak Cyst Classification Using Phantom and Radiologist Inter-Observer Selection |
title_full | Pilot Study for the Assessment of the Best Radiomic Features for Bosniak Cyst Classification Using Phantom and Radiologist Inter-Observer Selection |
title_fullStr | Pilot Study for the Assessment of the Best Radiomic Features for Bosniak Cyst Classification Using Phantom and Radiologist Inter-Observer Selection |
title_full_unstemmed | Pilot Study for the Assessment of the Best Radiomic Features for Bosniak Cyst Classification Using Phantom and Radiologist Inter-Observer Selection |
title_short | Pilot Study for the Assessment of the Best Radiomic Features for Bosniak Cyst Classification Using Phantom and Radiologist Inter-Observer Selection |
title_sort | pilot study for the assessment of the best radiomic features for bosniak cyst classification using phantom and radiologist inter-observer selection |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137782/ https://www.ncbi.nlm.nih.gov/pubmed/37189486 http://dx.doi.org/10.3390/diagnostics13081384 |
work_keys_str_mv | AT aymerichmaria pilotstudyfortheassessmentofthebestradiomicfeaturesforbosniakcystclassificationusingphantomandradiologistinterobserverselection AT riveiramartinmercedes pilotstudyfortheassessmentofthebestradiomicfeaturesforbosniakcystclassificationusingphantomandradiologistinterobserverselection AT garciabaizanalejandra pilotstudyfortheassessmentofthebestradiomicfeaturesforbosniakcystclassificationusingphantomandradiologistinterobserverselection AT gonzalezpenamarina pilotstudyfortheassessmentofthebestradiomicfeaturesforbosniakcystclassificationusingphantomandradiologistinterobserverselection AT sebastiacarmen pilotstudyfortheassessmentofthebestradiomicfeaturesforbosniakcystclassificationusingphantomandradiologistinterobserverselection AT lopezmedinaantonio pilotstudyfortheassessmentofthebestradiomicfeaturesforbosniakcystclassificationusingphantomandradiologistinterobserverselection AT mesaalvarezalicia pilotstudyfortheassessmentofthebestradiomicfeaturesforbosniakcystclassificationusingphantomandradiologistinterobserverselection AT tardagiladelafuentegonzalo pilotstudyfortheassessmentofthebestradiomicfeaturesforbosniakcystclassificationusingphantomandradiologistinterobserverselection AT mendezcastrillonmarta pilotstudyfortheassessmentofthebestradiomicfeaturesforbosniakcystclassificationusingphantomandradiologistinterobserverselection AT berbelrodriguezandrea pilotstudyfortheassessmentofthebestradiomicfeaturesforbosniakcystclassificationusingphantomandradiologistinterobserverselection AT matosugasalejandrac pilotstudyfortheassessmentofthebestradiomicfeaturesforbosniakcystclassificationusingphantomandradiologistinterobserverselection AT berenguerroberto pilotstudyfortheassessmentofthebestradiomicfeaturesforbosniakcystclassificationusingphantomandradiologistinterobserverselection AT sabatersebastia pilotstudyfortheassessmentofthebestradiomicfeaturesforbosniakcystclassificationusingphantomandradiologistinterobserverselection AT oterogarciamilagros pilotstudyfortheassessmentofthebestradiomicfeaturesforbosniakcystclassificationusingphantomandradiologistinterobserverselection |