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Pilot Study for the Assessment of the Best Radiomic Features for Bosniak Cyst Classification Using Phantom and Radiologist Inter-Observer Selection

Since the Bosniak cysts classification is highly reader-dependent, automated tools based on radiomics could help in the diagnosis of the lesion. This study is an initial step in the search for radiomic features that may be good classifiers of benign–malignant Bosniak cysts in machine learning models...

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Autores principales: Aymerich, María, Riveira-Martín, Mercedes, García-Baizán, Alejandra, González-Pena, Mariña, Sebastià, Carmen, López-Medina, Antonio, Mesa-Álvarez, Alicia, Tardágila de la Fuente, Gonzalo, Méndez-Castrillón, Marta, Berbel-Rodríguez, Andrea, Matos-Ugas, Alejandra C., Berenguer, Roberto, Sabater, Sebastià, Otero-García, Milagros
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137782/
https://www.ncbi.nlm.nih.gov/pubmed/37189486
http://dx.doi.org/10.3390/diagnostics13081384
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author Aymerich, María
Riveira-Martín, Mercedes
García-Baizán, Alejandra
González-Pena, Mariña
Sebastià, Carmen
López-Medina, Antonio
Mesa-Álvarez, Alicia
Tardágila de la Fuente, Gonzalo
Méndez-Castrillón, Marta
Berbel-Rodríguez, Andrea
Matos-Ugas, Alejandra C.
Berenguer, Roberto
Sabater, Sebastià
Otero-García, Milagros
author_facet Aymerich, María
Riveira-Martín, Mercedes
García-Baizán, Alejandra
González-Pena, Mariña
Sebastià, Carmen
López-Medina, Antonio
Mesa-Álvarez, Alicia
Tardágila de la Fuente, Gonzalo
Méndez-Castrillón, Marta
Berbel-Rodríguez, Andrea
Matos-Ugas, Alejandra C.
Berenguer, Roberto
Sabater, Sebastià
Otero-García, Milagros
author_sort Aymerich, María
collection PubMed
description Since the Bosniak cysts classification is highly reader-dependent, automated tools based on radiomics could help in the diagnosis of the lesion. This study is an initial step in the search for radiomic features that may be good classifiers of benign–malignant Bosniak cysts in machine learning models. A CCR phantom was used through five CT scanners. Registration was performed with ARIA software, while Quibim Precision was used for feature extraction. R software was used for the statistical analysis. Robust radiomic features based on repeatability and reproducibility criteria were chosen. Excellent correlation criteria between different radiologists during lesion segmentation were imposed. With the selected features, their classification ability in benignity–malignity terms was assessed. From the phantom study, 25.3% of the features were robust. For the study of inter-observer correlation (ICC) in the segmentation of cystic masses, 82 subjects were prospectively selected, finding 48.4% of the features as excellent regarding concordance. Comparing both datasets, 12 features were established as repeatable, reproducible, and useful for the classification of Bosniak cysts and could serve as initial candidates for the elaboration of a classification model. With those features, the Linear Discriminant Analysis model classified the Bosniak cysts in terms of benignity or malignancy with 88.2% accuracy.
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spelling pubmed-101377822023-04-28 Pilot Study for the Assessment of the Best Radiomic Features for Bosniak Cyst Classification Using Phantom and Radiologist Inter-Observer Selection Aymerich, María Riveira-Martín, Mercedes García-Baizán, Alejandra González-Pena, Mariña Sebastià, Carmen López-Medina, Antonio Mesa-Álvarez, Alicia Tardágila de la Fuente, Gonzalo Méndez-Castrillón, Marta Berbel-Rodríguez, Andrea Matos-Ugas, Alejandra C. Berenguer, Roberto Sabater, Sebastià Otero-García, Milagros Diagnostics (Basel) Article Since the Bosniak cysts classification is highly reader-dependent, automated tools based on radiomics could help in the diagnosis of the lesion. This study is an initial step in the search for radiomic features that may be good classifiers of benign–malignant Bosniak cysts in machine learning models. A CCR phantom was used through five CT scanners. Registration was performed with ARIA software, while Quibim Precision was used for feature extraction. R software was used for the statistical analysis. Robust radiomic features based on repeatability and reproducibility criteria were chosen. Excellent correlation criteria between different radiologists during lesion segmentation were imposed. With the selected features, their classification ability in benignity–malignity terms was assessed. From the phantom study, 25.3% of the features were robust. For the study of inter-observer correlation (ICC) in the segmentation of cystic masses, 82 subjects were prospectively selected, finding 48.4% of the features as excellent regarding concordance. Comparing both datasets, 12 features were established as repeatable, reproducible, and useful for the classification of Bosniak cysts and could serve as initial candidates for the elaboration of a classification model. With those features, the Linear Discriminant Analysis model classified the Bosniak cysts in terms of benignity or malignancy with 88.2% accuracy. MDPI 2023-04-10 /pmc/articles/PMC10137782/ /pubmed/37189486 http://dx.doi.org/10.3390/diagnostics13081384 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Aymerich, María
Riveira-Martín, Mercedes
García-Baizán, Alejandra
González-Pena, Mariña
Sebastià, Carmen
López-Medina, Antonio
Mesa-Álvarez, Alicia
Tardágila de la Fuente, Gonzalo
Méndez-Castrillón, Marta
Berbel-Rodríguez, Andrea
Matos-Ugas, Alejandra C.
Berenguer, Roberto
Sabater, Sebastià
Otero-García, Milagros
Pilot Study for the Assessment of the Best Radiomic Features for Bosniak Cyst Classification Using Phantom and Radiologist Inter-Observer Selection
title Pilot Study for the Assessment of the Best Radiomic Features for Bosniak Cyst Classification Using Phantom and Radiologist Inter-Observer Selection
title_full Pilot Study for the Assessment of the Best Radiomic Features for Bosniak Cyst Classification Using Phantom and Radiologist Inter-Observer Selection
title_fullStr Pilot Study for the Assessment of the Best Radiomic Features for Bosniak Cyst Classification Using Phantom and Radiologist Inter-Observer Selection
title_full_unstemmed Pilot Study for the Assessment of the Best Radiomic Features for Bosniak Cyst Classification Using Phantom and Radiologist Inter-Observer Selection
title_short Pilot Study for the Assessment of the Best Radiomic Features for Bosniak Cyst Classification Using Phantom and Radiologist Inter-Observer Selection
title_sort pilot study for the assessment of the best radiomic features for bosniak cyst classification using phantom and radiologist inter-observer selection
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137782/
https://www.ncbi.nlm.nih.gov/pubmed/37189486
http://dx.doi.org/10.3390/diagnostics13081384
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