Cargando…

Nucleotide Context Can Modulate Promoter Strength in Genes Transcribed by RNA Polymerase III

The small nuclear RNAs 4.5SH and 4.5SI were characterized only in mouse-like rodents; their genes originate from 7SL RNA and tRNA, respectively. Similar to many genes transcribed by RNA polymerase III (pol III), the genes of 4.5SH and 4.5SI RNAs include boxes A and B, forming an intergenic pol III-d...

Descripción completa

Detalles Bibliográficos
Autores principales:	Stasenko, Danil V., Tatosyan, Karina A., Borodulina, Olga R., Kramerov, Dmitri A.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2023
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137851/ https://www.ncbi.nlm.nih.gov/pubmed/37107560 http://dx.doi.org/10.3390/genes14040802

Ejemplares similares

TATA-Like Boxes in RNA Polymerase III Promoters: Requirements for Nucleotide Sequences
por: Tatosyan, Karina A., et al.
Publicado: (2020)

SINEs as Potential Expression Cassettes: Impact of Deletions and Insertions on Polyadenylation and Lifetime of B2 and Ves SINE Transcripts Generated by RNA Polymerase III
por: Borodulina, Olga R., et al.
Publicado: (2023)

Tail Wags Dog’s SINE: Retropositional Mechanisms of Can SINE Depend on Its A-Tail Structure
por: Kosushkin, Sergei A., et al.
Publicado: (2022)

Complementarity of End Regions Increases the Lifetime of Small RNAs in Mammalian Cells
por: Koval, Anastasia P., et al.
Publicado: (2012)

Transcribing RNA polymerase III observed by electron cryomicroscopy
por: Hoffmann, Niklas A., et al.
Publicado: (2016)

Molecular structures of unbound and transcribing RNA polymerase III
por: Hoffmann, Niklas A., et al.
Publicado: (2015)

Retrotransposon targeting to RNA polymerase III-transcribed genes
por: Cheung, Stephanie, et al.
Publicado: (2018)

Analysis of SINE Families B2, Dip, and Ves with Special Reference to Polyadenylation Signals and Transcription Terminators
por: Vassetzky, Nikita S., et al.
Publicado: (2021)

Cryo-EM structures of human RNA polymerase III in its unbound and transcribing states
por: Girbig, Mathias, et al.
Publicado: (2021)

Structural basis of Ty3 retrotransposon integration at RNA Polymerase III-transcribed genes
por: Abascal-Palacios, Guillermo, et al.
Publicado: (2021)

Molecular Structures of Transcribing RNA Polymerase I
por: Tafur, Lucas, et al.
Publicado: (2016)

Identification of RNA polymerase III-transcribed Alu loci by computational screening of RNA-Seq data
por: Conti, Anastasia, et al.
Publicado: (2015)

Structural snapshots of actively transcribing influenza polymerase
por: Kouba, Tomas, et al.
Publicado: (2019)

Decoding the principles underlying the frequency of association with nucleoli for RNA polymerase III–transcribed genes in budding yeast
por: Belagal, Praveen, et al.
Publicado: (2016)

Identification of RNA Polymerase III-Transcribed SINEs at Single-Locus Resolution from RNA Sequencing Data
por: Carnevali, Davide, et al.
Publicado: (2017)

Structure of transcribing RNA polymerase II-nucleosome complex
por: Farnung, Lucas, et al.
Publicado: (2018)

Genome-wide analysis of polymerase III–transcribed Alu elements suggests cell-type–specific enhancer function
por: Zhang, Xiao-Ou, et al.
Publicado: (2019)

Transcription-dependent enrichment of the yeast FACT complex influences nucleosome dynamics on the RNA polymerase III-transcribed genes
por: Shukla, Ashutosh, et al.
Publicado: (2021)

nc886, an RNA Polymerase III-Transcribed Noncoding RNA Whose Expression Is Dynamic and Regulated by Intriguing Mechanisms
por: Lee, Yeon-Su, et al.
Publicado: (2023)

The elongation rate of RNA polymerase determines the fate of transcribed nucleosomes
por: Bintu, Lacramioara, et al.
Publicado: (2011)

Eukaryotic RNA Polymerases: The Many Ways to Transcribe a Gene
por: Barba-Aliaga, Marina, et al.
Publicado: (2021)

Relative effects of mutability and selection on single nucleotide polymorphisms in transcribed regions of the human genome
por: Gorlov, Ivan P, et al.
Publicado: (2008)

A Mechanistic Model for Cooperative Behavior of Co-transcribing RNA Polymerases
por: Heberling, Tamra, et al.
Publicado: (2016)

DNA supercoiling-mediated collective behavior of co-transcribing RNA polymerases
por: Tripathi, Shubham, et al.
Publicado: (2021)

Energy efficiency trade-offs drive nucleotide usage in transcribed regions
por: Chen, Wei-Hua, et al.
Publicado: (2016)

Interaction between transcribing RNA polymerase and topoisomerase I prevents R-loop formation in E. coli
por: Sutormin, Dmitry, et al.
Publicado: (2022)

Uniform Distribution of Elongating RNA Polymerase II Complexes in Transcribed Gene Locus
por: Peil, Kadri, et al.
Publicado: (2011)

tRNA(Sec) is transcribed by RNA polymerase II in Trypanosoma brucei but not in humans
por: Aeby, Eric, et al.
Publicado: (2010)

T7 RNA polymerase non-specifically transcribes and induces disassembly of DNA nanostructures
por: Schaffter, Samuel W, et al.
Publicado: (2018)

Regulation of expression of human RNA polymerase II-transcribed snRNA genes
por: Guiro, Joana, et al.
Publicado: (2017)

Mitochondrial Genes of Dinoflagellates Are Transcribed by a Nuclear-Encoded Single-Subunit RNA Polymerase
por: Teng, Chang Ying, et al.
Publicado: (2013)

The identity and methylation status of the first transcribed nucleotide in eukaryotic mRNA 5′ cap modulates protein expression in living cells
por: Sikorski, Pawel J, et al.
Publicado: (2020)

Evidence that dissociation of Spt16 from transcribed genes is partially dependent on RNA Polymerase II termination
por: Campbell, Jessica B., et al.
Publicado: (2019)

SINEBase: a database and tool for SINE analysis
por: Vassetzky, Nikita S., et al.
Publicado: (2013)

A novel TBP-TAF complex on RNA Polymerase II-transcribed snRNA genes
por: Zaborowska, Justyna, et al.
Publicado: (2012)

The SAGA coactivator complex acts on the whole transcribed genome and is required for RNA polymerase II transcription
por: Bonnet, Jacques, et al.
Publicado: (2014)

Transcribed in synchronicity
por: LeBrasseur, Nicole
Publicado: (2003)

PRC2 regulates RNA polymerase III transcribed non-translated RNA gene transcription through EZH2 and SUZ12 interaction with TFIIIC complex
por: Liu, Chang, et al.
Publicado: (2015)

SNOntology: Myriads of novel snornas or just a mirage?
por: Makarova, Julia A, et al.
Publicado: (2011)

Exonuclease resistant 18S and 25S ribosomal RNA components in yeast are possibly newly transcribed by RNA polymerase II
por: Fleischmann, Jacob, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_tvof85tneio9r18huck8b194pg