Cargando…

Genome-Wide Association Studies of Live Weight at First Breeding at Eight Months of Age and Pregnancy Status of Ewe Lambs

This study estimated genetic parameters and identified candidate genes associated with live weight, and the occurrence of pregnancy in 1327 Romney ewe lambs using genome-wide association studies. Phenotypic traits considered were the occurrence of pregnancy in ewe lambs and live weight at eight mont...

Descripción completa

Detalles Bibliográficos
Autores principales: Haslin, Emmanuelle, Pettigrew, Emma J., Hickson, Rebecca E., Kenyon, Paul R., Gedye, Kristene R., Lopez-Villalobos, Nicolas, Jayawardana, J. M. D. R., Morris, Stephen T., Blair, Hugh T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137859/
https://www.ncbi.nlm.nih.gov/pubmed/37107563
http://dx.doi.org/10.3390/genes14040805
_version_ 1785032567868620800
author Haslin, Emmanuelle
Pettigrew, Emma J.
Hickson, Rebecca E.
Kenyon, Paul R.
Gedye, Kristene R.
Lopez-Villalobos, Nicolas
Jayawardana, J. M. D. R.
Morris, Stephen T.
Blair, Hugh T.
author_facet Haslin, Emmanuelle
Pettigrew, Emma J.
Hickson, Rebecca E.
Kenyon, Paul R.
Gedye, Kristene R.
Lopez-Villalobos, Nicolas
Jayawardana, J. M. D. R.
Morris, Stephen T.
Blair, Hugh T.
author_sort Haslin, Emmanuelle
collection PubMed
description This study estimated genetic parameters and identified candidate genes associated with live weight, and the occurrence of pregnancy in 1327 Romney ewe lambs using genome-wide association studies. Phenotypic traits considered were the occurrence of pregnancy in ewe lambs and live weight at eight months of age. Genetic parameters were estimated, and genomic variation was assessed using 13,500 single-nucleotide polymorphic markers (SNPs). Ewe lamb live weight had medium genomic heritability and was positively genetically correlated with occurrence of pregnancy. This suggests that selection for heavier ewe lambs is possible and would likely improve the occurrence of pregnancy in ewe lambs. No SNPs were associated with the occurrence of pregnancy; however, three candidate genes were associated with ewe lamb live weight. Tenascin C (TNC), TNF superfamily member 8 (TNFSF8) and Collagen type XXVIII alpha 1 chain (COL28A1) are involved in extracellular matrix organization and regulation of cell fate in the immune system. TNC may be involved in ewe lamb growth, and therefore, could be of interest for selection of ewe lamb replacements. The association between ewe lamb live weight and TNFSF8 and COL28A1 is unclear. Further research is needed using a larger population to determine whether the genes identified can be used for genomic selection of replacement ewe lambs.
format Online
Article
Text
id pubmed-10137859
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-101378592023-04-28 Genome-Wide Association Studies of Live Weight at First Breeding at Eight Months of Age and Pregnancy Status of Ewe Lambs Haslin, Emmanuelle Pettigrew, Emma J. Hickson, Rebecca E. Kenyon, Paul R. Gedye, Kristene R. Lopez-Villalobos, Nicolas Jayawardana, J. M. D. R. Morris, Stephen T. Blair, Hugh T. Genes (Basel) Article This study estimated genetic parameters and identified candidate genes associated with live weight, and the occurrence of pregnancy in 1327 Romney ewe lambs using genome-wide association studies. Phenotypic traits considered were the occurrence of pregnancy in ewe lambs and live weight at eight months of age. Genetic parameters were estimated, and genomic variation was assessed using 13,500 single-nucleotide polymorphic markers (SNPs). Ewe lamb live weight had medium genomic heritability and was positively genetically correlated with occurrence of pregnancy. This suggests that selection for heavier ewe lambs is possible and would likely improve the occurrence of pregnancy in ewe lambs. No SNPs were associated with the occurrence of pregnancy; however, three candidate genes were associated with ewe lamb live weight. Tenascin C (TNC), TNF superfamily member 8 (TNFSF8) and Collagen type XXVIII alpha 1 chain (COL28A1) are involved in extracellular matrix organization and regulation of cell fate in the immune system. TNC may be involved in ewe lamb growth, and therefore, could be of interest for selection of ewe lamb replacements. The association between ewe lamb live weight and TNFSF8 and COL28A1 is unclear. Further research is needed using a larger population to determine whether the genes identified can be used for genomic selection of replacement ewe lambs. MDPI 2023-03-27 /pmc/articles/PMC10137859/ /pubmed/37107563 http://dx.doi.org/10.3390/genes14040805 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Haslin, Emmanuelle
Pettigrew, Emma J.
Hickson, Rebecca E.
Kenyon, Paul R.
Gedye, Kristene R.
Lopez-Villalobos, Nicolas
Jayawardana, J. M. D. R.
Morris, Stephen T.
Blair, Hugh T.
Genome-Wide Association Studies of Live Weight at First Breeding at Eight Months of Age and Pregnancy Status of Ewe Lambs
title Genome-Wide Association Studies of Live Weight at First Breeding at Eight Months of Age and Pregnancy Status of Ewe Lambs
title_full Genome-Wide Association Studies of Live Weight at First Breeding at Eight Months of Age and Pregnancy Status of Ewe Lambs
title_fullStr Genome-Wide Association Studies of Live Weight at First Breeding at Eight Months of Age and Pregnancy Status of Ewe Lambs
title_full_unstemmed Genome-Wide Association Studies of Live Weight at First Breeding at Eight Months of Age and Pregnancy Status of Ewe Lambs
title_short Genome-Wide Association Studies of Live Weight at First Breeding at Eight Months of Age and Pregnancy Status of Ewe Lambs
title_sort genome-wide association studies of live weight at first breeding at eight months of age and pregnancy status of ewe lambs
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137859/
https://www.ncbi.nlm.nih.gov/pubmed/37107563
http://dx.doi.org/10.3390/genes14040805
work_keys_str_mv AT haslinemmanuelle genomewideassociationstudiesofliveweightatfirstbreedingateightmonthsofageandpregnancystatusofewelambs
AT pettigrewemmaj genomewideassociationstudiesofliveweightatfirstbreedingateightmonthsofageandpregnancystatusofewelambs
AT hicksonrebeccae genomewideassociationstudiesofliveweightatfirstbreedingateightmonthsofageandpregnancystatusofewelambs
AT kenyonpaulr genomewideassociationstudiesofliveweightatfirstbreedingateightmonthsofageandpregnancystatusofewelambs
AT gedyekristener genomewideassociationstudiesofliveweightatfirstbreedingateightmonthsofageandpregnancystatusofewelambs
AT lopezvillalobosnicolas genomewideassociationstudiesofliveweightatfirstbreedingateightmonthsofageandpregnancystatusofewelambs
AT jayawardanajmdr genomewideassociationstudiesofliveweightatfirstbreedingateightmonthsofageandpregnancystatusofewelambs
AT morrisstephent genomewideassociationstudiesofliveweightatfirstbreedingateightmonthsofageandpregnancystatusofewelambs
AT blairhught genomewideassociationstudiesofliveweightatfirstbreedingateightmonthsofageandpregnancystatusofewelambs