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Genome-Wide Association Studies of Live Weight at First Breeding at Eight Months of Age and Pregnancy Status of Ewe Lambs
This study estimated genetic parameters and identified candidate genes associated with live weight, and the occurrence of pregnancy in 1327 Romney ewe lambs using genome-wide association studies. Phenotypic traits considered were the occurrence of pregnancy in ewe lambs and live weight at eight mont...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137859/ https://www.ncbi.nlm.nih.gov/pubmed/37107563 http://dx.doi.org/10.3390/genes14040805 |
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author | Haslin, Emmanuelle Pettigrew, Emma J. Hickson, Rebecca E. Kenyon, Paul R. Gedye, Kristene R. Lopez-Villalobos, Nicolas Jayawardana, J. M. D. R. Morris, Stephen T. Blair, Hugh T. |
author_facet | Haslin, Emmanuelle Pettigrew, Emma J. Hickson, Rebecca E. Kenyon, Paul R. Gedye, Kristene R. Lopez-Villalobos, Nicolas Jayawardana, J. M. D. R. Morris, Stephen T. Blair, Hugh T. |
author_sort | Haslin, Emmanuelle |
collection | PubMed |
description | This study estimated genetic parameters and identified candidate genes associated with live weight, and the occurrence of pregnancy in 1327 Romney ewe lambs using genome-wide association studies. Phenotypic traits considered were the occurrence of pregnancy in ewe lambs and live weight at eight months of age. Genetic parameters were estimated, and genomic variation was assessed using 13,500 single-nucleotide polymorphic markers (SNPs). Ewe lamb live weight had medium genomic heritability and was positively genetically correlated with occurrence of pregnancy. This suggests that selection for heavier ewe lambs is possible and would likely improve the occurrence of pregnancy in ewe lambs. No SNPs were associated with the occurrence of pregnancy; however, three candidate genes were associated with ewe lamb live weight. Tenascin C (TNC), TNF superfamily member 8 (TNFSF8) and Collagen type XXVIII alpha 1 chain (COL28A1) are involved in extracellular matrix organization and regulation of cell fate in the immune system. TNC may be involved in ewe lamb growth, and therefore, could be of interest for selection of ewe lamb replacements. The association between ewe lamb live weight and TNFSF8 and COL28A1 is unclear. Further research is needed using a larger population to determine whether the genes identified can be used for genomic selection of replacement ewe lambs. |
format | Online Article Text |
id | pubmed-10137859 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-101378592023-04-28 Genome-Wide Association Studies of Live Weight at First Breeding at Eight Months of Age and Pregnancy Status of Ewe Lambs Haslin, Emmanuelle Pettigrew, Emma J. Hickson, Rebecca E. Kenyon, Paul R. Gedye, Kristene R. Lopez-Villalobos, Nicolas Jayawardana, J. M. D. R. Morris, Stephen T. Blair, Hugh T. Genes (Basel) Article This study estimated genetic parameters and identified candidate genes associated with live weight, and the occurrence of pregnancy in 1327 Romney ewe lambs using genome-wide association studies. Phenotypic traits considered were the occurrence of pregnancy in ewe lambs and live weight at eight months of age. Genetic parameters were estimated, and genomic variation was assessed using 13,500 single-nucleotide polymorphic markers (SNPs). Ewe lamb live weight had medium genomic heritability and was positively genetically correlated with occurrence of pregnancy. This suggests that selection for heavier ewe lambs is possible and would likely improve the occurrence of pregnancy in ewe lambs. No SNPs were associated with the occurrence of pregnancy; however, three candidate genes were associated with ewe lamb live weight. Tenascin C (TNC), TNF superfamily member 8 (TNFSF8) and Collagen type XXVIII alpha 1 chain (COL28A1) are involved in extracellular matrix organization and regulation of cell fate in the immune system. TNC may be involved in ewe lamb growth, and therefore, could be of interest for selection of ewe lamb replacements. The association between ewe lamb live weight and TNFSF8 and COL28A1 is unclear. Further research is needed using a larger population to determine whether the genes identified can be used for genomic selection of replacement ewe lambs. MDPI 2023-03-27 /pmc/articles/PMC10137859/ /pubmed/37107563 http://dx.doi.org/10.3390/genes14040805 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Haslin, Emmanuelle Pettigrew, Emma J. Hickson, Rebecca E. Kenyon, Paul R. Gedye, Kristene R. Lopez-Villalobos, Nicolas Jayawardana, J. M. D. R. Morris, Stephen T. Blair, Hugh T. Genome-Wide Association Studies of Live Weight at First Breeding at Eight Months of Age and Pregnancy Status of Ewe Lambs |
title | Genome-Wide Association Studies of Live Weight at First Breeding at Eight Months of Age and Pregnancy Status of Ewe Lambs |
title_full | Genome-Wide Association Studies of Live Weight at First Breeding at Eight Months of Age and Pregnancy Status of Ewe Lambs |
title_fullStr | Genome-Wide Association Studies of Live Weight at First Breeding at Eight Months of Age and Pregnancy Status of Ewe Lambs |
title_full_unstemmed | Genome-Wide Association Studies of Live Weight at First Breeding at Eight Months of Age and Pregnancy Status of Ewe Lambs |
title_short | Genome-Wide Association Studies of Live Weight at First Breeding at Eight Months of Age and Pregnancy Status of Ewe Lambs |
title_sort | genome-wide association studies of live weight at first breeding at eight months of age and pregnancy status of ewe lambs |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10137859/ https://www.ncbi.nlm.nih.gov/pubmed/37107563 http://dx.doi.org/10.3390/genes14040805 |
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