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Butterfly Transforms for Efficient Representation of Spatially Variant Point Spread Functions in Bayesian Imaging
Bayesian imaging algorithms are becoming increasingly important in, e.g., astronomy, medicine and biology. Given that many of these algorithms compute iterative solutions to high-dimensional inverse problems, the efficiency and accuracy of the instrument response representation are of high importanc...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10138018/ https://www.ncbi.nlm.nih.gov/pubmed/37190440 http://dx.doi.org/10.3390/e25040652 |
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author | Eberle, Vincent Frank, Philipp Stadler, Julia Streit, Silvan Enßlin, Torsten |
author_facet | Eberle, Vincent Frank, Philipp Stadler, Julia Streit, Silvan Enßlin, Torsten |
author_sort | Eberle, Vincent |
collection | PubMed |
description | Bayesian imaging algorithms are becoming increasingly important in, e.g., astronomy, medicine and biology. Given that many of these algorithms compute iterative solutions to high-dimensional inverse problems, the efficiency and accuracy of the instrument response representation are of high importance for the imaging process. For efficiency reasons, point spread functions, which make up a large fraction of the response functions of telescopes and microscopes, are usually assumed to be spatially invariant in a given field of view and can thus be represented by a convolution. For many instruments, this assumption does not hold and degrades the accuracy of the instrument representation. Here, we discuss the application of butterfly transforms, which are linear neural network structures whose sizes scale sub-quadratically with the number of data points. Butterfly transforms are efficient by design, since they are inspired by the structure of the Cooley–Tukey fast Fourier transform. In this work, we combine them in several ways into butterfly networks, compare the different architectures with respect to their performance and identify a representation that is suitable for the efficient representation of a synthetic spatially variant point spread function up to a [Formula: see text] error. Furthermore, we show its application in a short synthetic example. |
format | Online Article Text |
id | pubmed-10138018 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-101380182023-04-28 Butterfly Transforms for Efficient Representation of Spatially Variant Point Spread Functions in Bayesian Imaging Eberle, Vincent Frank, Philipp Stadler, Julia Streit, Silvan Enßlin, Torsten Entropy (Basel) Article Bayesian imaging algorithms are becoming increasingly important in, e.g., astronomy, medicine and biology. Given that many of these algorithms compute iterative solutions to high-dimensional inverse problems, the efficiency and accuracy of the instrument response representation are of high importance for the imaging process. For efficiency reasons, point spread functions, which make up a large fraction of the response functions of telescopes and microscopes, are usually assumed to be spatially invariant in a given field of view and can thus be represented by a convolution. For many instruments, this assumption does not hold and degrades the accuracy of the instrument representation. Here, we discuss the application of butterfly transforms, which are linear neural network structures whose sizes scale sub-quadratically with the number of data points. Butterfly transforms are efficient by design, since they are inspired by the structure of the Cooley–Tukey fast Fourier transform. In this work, we combine them in several ways into butterfly networks, compare the different architectures with respect to their performance and identify a representation that is suitable for the efficient representation of a synthetic spatially variant point spread function up to a [Formula: see text] error. Furthermore, we show its application in a short synthetic example. MDPI 2023-04-13 /pmc/articles/PMC10138018/ /pubmed/37190440 http://dx.doi.org/10.3390/e25040652 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Eberle, Vincent Frank, Philipp Stadler, Julia Streit, Silvan Enßlin, Torsten Butterfly Transforms for Efficient Representation of Spatially Variant Point Spread Functions in Bayesian Imaging |
title | Butterfly Transforms for Efficient Representation of Spatially Variant Point Spread Functions in Bayesian Imaging |
title_full | Butterfly Transforms for Efficient Representation of Spatially Variant Point Spread Functions in Bayesian Imaging |
title_fullStr | Butterfly Transforms for Efficient Representation of Spatially Variant Point Spread Functions in Bayesian Imaging |
title_full_unstemmed | Butterfly Transforms for Efficient Representation of Spatially Variant Point Spread Functions in Bayesian Imaging |
title_short | Butterfly Transforms for Efficient Representation of Spatially Variant Point Spread Functions in Bayesian Imaging |
title_sort | butterfly transforms for efficient representation of spatially variant point spread functions in bayesian imaging |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10138018/ https://www.ncbi.nlm.nih.gov/pubmed/37190440 http://dx.doi.org/10.3390/e25040652 |
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