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Peeping into Mitochondrial Diversity of Andaman Goats: Unveils Possibility of Maritime Transport with Diversified Geographic Signaling

Andaman and Nicobar Islands, a part of South-East Asia, is enriched with the presence of native breeds of livestock (cattle, pig, goat) and poultry. There are two native goat breeds, viz., Andaman local goat and Teressa goat in Andaman and Nicobar Islands. However, to date, the origin and genetic ma...

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Autores principales: De, Arun Kumar, Sawhney, Sneha, Sunder, Jai, Muthiyan, Ramachandran, Ponraj, Perumal, Sujatha, Tamilvanan, Malakar, Dhruba, Mondal, Samiran, Bera, Asit Kumar, Kumar, Ashish, Chakurkar, Eaknath Bhanudasrao, Bhattacharya, Debasis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10138289/
https://www.ncbi.nlm.nih.gov/pubmed/37107542
http://dx.doi.org/10.3390/genes14040784
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author De, Arun Kumar
Sawhney, Sneha
Sunder, Jai
Muthiyan, Ramachandran
Ponraj, Perumal
Sujatha, Tamilvanan
Malakar, Dhruba
Mondal, Samiran
Bera, Asit Kumar
Kumar, Ashish
Chakurkar, Eaknath Bhanudasrao
Bhattacharya, Debasis
author_facet De, Arun Kumar
Sawhney, Sneha
Sunder, Jai
Muthiyan, Ramachandran
Ponraj, Perumal
Sujatha, Tamilvanan
Malakar, Dhruba
Mondal, Samiran
Bera, Asit Kumar
Kumar, Ashish
Chakurkar, Eaknath Bhanudasrao
Bhattacharya, Debasis
author_sort De, Arun Kumar
collection PubMed
description Andaman and Nicobar Islands, a part of South-East Asia, is enriched with the presence of native breeds of livestock (cattle, pig, goat) and poultry. There are two native goat breeds, viz., Andaman local goat and Teressa goat in Andaman and Nicobar Islands. However, to date, the origin and genetic makeup of these two breeds have not been detailed. Therefore, the present study describes the genetic makeup of Andaman goats through analysis of mitochondrial D-loop sequence for sequence polymorphism, phylogeographical signaling and population expansion events. The genetic diversity of the Teressa goat was less compared to the Andaman local goat due to its sole presence on Teressa Island. Out of 38 well-defined haplotypes of Andaman goats, the majority of haplotypes belonged to haplogroup A followed by haplogroup B and haplogroup D. The result of mismatch distribution and neutrality tests indicated no population expansion event of haplogroup A and B. Finally, based on poor geographical signaling, we hypothesize that Andaman goats have been imported to these Islands either through multidirectional diffusion or unidirectional diffusion. We justify our hypothesis of multidirectional diffusion on the basis of observation of the haplotype and nucleotide diversity of Andaman goats. Simultaneously, the probability of unidirectional diffusion of goats in these islands from the Indian subcontinent in different spells of domestication events through maritime routes cannot be ignored.
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spelling pubmed-101382892023-04-28 Peeping into Mitochondrial Diversity of Andaman Goats: Unveils Possibility of Maritime Transport with Diversified Geographic Signaling De, Arun Kumar Sawhney, Sneha Sunder, Jai Muthiyan, Ramachandran Ponraj, Perumal Sujatha, Tamilvanan Malakar, Dhruba Mondal, Samiran Bera, Asit Kumar Kumar, Ashish Chakurkar, Eaknath Bhanudasrao Bhattacharya, Debasis Genes (Basel) Article Andaman and Nicobar Islands, a part of South-East Asia, is enriched with the presence of native breeds of livestock (cattle, pig, goat) and poultry. There are two native goat breeds, viz., Andaman local goat and Teressa goat in Andaman and Nicobar Islands. However, to date, the origin and genetic makeup of these two breeds have not been detailed. Therefore, the present study describes the genetic makeup of Andaman goats through analysis of mitochondrial D-loop sequence for sequence polymorphism, phylogeographical signaling and population expansion events. The genetic diversity of the Teressa goat was less compared to the Andaman local goat due to its sole presence on Teressa Island. Out of 38 well-defined haplotypes of Andaman goats, the majority of haplotypes belonged to haplogroup A followed by haplogroup B and haplogroup D. The result of mismatch distribution and neutrality tests indicated no population expansion event of haplogroup A and B. Finally, based on poor geographical signaling, we hypothesize that Andaman goats have been imported to these Islands either through multidirectional diffusion or unidirectional diffusion. We justify our hypothesis of multidirectional diffusion on the basis of observation of the haplotype and nucleotide diversity of Andaman goats. Simultaneously, the probability of unidirectional diffusion of goats in these islands from the Indian subcontinent in different spells of domestication events through maritime routes cannot be ignored. MDPI 2023-03-24 /pmc/articles/PMC10138289/ /pubmed/37107542 http://dx.doi.org/10.3390/genes14040784 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
De, Arun Kumar
Sawhney, Sneha
Sunder, Jai
Muthiyan, Ramachandran
Ponraj, Perumal
Sujatha, Tamilvanan
Malakar, Dhruba
Mondal, Samiran
Bera, Asit Kumar
Kumar, Ashish
Chakurkar, Eaknath Bhanudasrao
Bhattacharya, Debasis
Peeping into Mitochondrial Diversity of Andaman Goats: Unveils Possibility of Maritime Transport with Diversified Geographic Signaling
title Peeping into Mitochondrial Diversity of Andaman Goats: Unveils Possibility of Maritime Transport with Diversified Geographic Signaling
title_full Peeping into Mitochondrial Diversity of Andaman Goats: Unveils Possibility of Maritime Transport with Diversified Geographic Signaling
title_fullStr Peeping into Mitochondrial Diversity of Andaman Goats: Unveils Possibility of Maritime Transport with Diversified Geographic Signaling
title_full_unstemmed Peeping into Mitochondrial Diversity of Andaman Goats: Unveils Possibility of Maritime Transport with Diversified Geographic Signaling
title_short Peeping into Mitochondrial Diversity of Andaman Goats: Unveils Possibility of Maritime Transport with Diversified Geographic Signaling
title_sort peeping into mitochondrial diversity of andaman goats: unveils possibility of maritime transport with diversified geographic signaling
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10138289/
https://www.ncbi.nlm.nih.gov/pubmed/37107542
http://dx.doi.org/10.3390/genes14040784
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