Cargando…
An open-source framework for synthetic post-dive Doppler ultrasound audio generation
Doppler ultrasound (DU) measurements are used to detect and evaluate venous gas emboli (VGE) formed after decompression. Automated methodologies for assessing VGE presence using signal processing have been developed on varying real-world datasets of limited size and without ground truth values preve...
Autores principales: | , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10138468/ https://www.ncbi.nlm.nih.gov/pubmed/37104279 http://dx.doi.org/10.1371/journal.pone.0284922 |
_version_ | 1785032713976152064 |
---|---|
author | Le, David Q. Hoang, Andrew H. Azarang, Arian Lance, Rachel M. Natoli, Michael Gatrell, Alan Blogg, S. Lesley Dayton, Paul A. Tillmans, Frauke Lindholm, Peter Moon, Richard E. Papadopoulou, Virginie |
author_facet | Le, David Q. Hoang, Andrew H. Azarang, Arian Lance, Rachel M. Natoli, Michael Gatrell, Alan Blogg, S. Lesley Dayton, Paul A. Tillmans, Frauke Lindholm, Peter Moon, Richard E. Papadopoulou, Virginie |
author_sort | Le, David Q. |
collection | PubMed |
description | Doppler ultrasound (DU) measurements are used to detect and evaluate venous gas emboli (VGE) formed after decompression. Automated methodologies for assessing VGE presence using signal processing have been developed on varying real-world datasets of limited size and without ground truth values preventing objective evaluation. We develop and report a method to generate synthetic post-dive data using DU signals collected in both precordium and subclavian vein with varying degrees of bubbling matching field-standard grading metrics. This method is adaptable, modifiable, and reproducible, allowing for researchers to tune the produced dataset for their desired purpose. We provide the baseline Doppler recordings and code required to generate synthetic data for researchers to reproduce our work and improve upon it. We also provide a set of pre-made synthetic post-dive DU data spanning six scenarios representing the Spencer and Kisman-Masurel (KM) grading scales as well as precordial and subclavian DU recordings. By providing a method for synthetic post-dive DU data generation, we aim to improve and accelerate the development of signal processing techniques for VGE analysis in Doppler ultrasound. |
format | Online Article Text |
id | pubmed-10138468 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-101384682023-04-28 An open-source framework for synthetic post-dive Doppler ultrasound audio generation Le, David Q. Hoang, Andrew H. Azarang, Arian Lance, Rachel M. Natoli, Michael Gatrell, Alan Blogg, S. Lesley Dayton, Paul A. Tillmans, Frauke Lindholm, Peter Moon, Richard E. Papadopoulou, Virginie PLoS One Research Article Doppler ultrasound (DU) measurements are used to detect and evaluate venous gas emboli (VGE) formed after decompression. Automated methodologies for assessing VGE presence using signal processing have been developed on varying real-world datasets of limited size and without ground truth values preventing objective evaluation. We develop and report a method to generate synthetic post-dive data using DU signals collected in both precordium and subclavian vein with varying degrees of bubbling matching field-standard grading metrics. This method is adaptable, modifiable, and reproducible, allowing for researchers to tune the produced dataset for their desired purpose. We provide the baseline Doppler recordings and code required to generate synthetic data for researchers to reproduce our work and improve upon it. We also provide a set of pre-made synthetic post-dive DU data spanning six scenarios representing the Spencer and Kisman-Masurel (KM) grading scales as well as precordial and subclavian DU recordings. By providing a method for synthetic post-dive DU data generation, we aim to improve and accelerate the development of signal processing techniques for VGE analysis in Doppler ultrasound. Public Library of Science 2023-04-27 /pmc/articles/PMC10138468/ /pubmed/37104279 http://dx.doi.org/10.1371/journal.pone.0284922 Text en © 2023 Le et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Le, David Q. Hoang, Andrew H. Azarang, Arian Lance, Rachel M. Natoli, Michael Gatrell, Alan Blogg, S. Lesley Dayton, Paul A. Tillmans, Frauke Lindholm, Peter Moon, Richard E. Papadopoulou, Virginie An open-source framework for synthetic post-dive Doppler ultrasound audio generation |
title | An open-source framework for synthetic post-dive Doppler ultrasound audio generation |
title_full | An open-source framework for synthetic post-dive Doppler ultrasound audio generation |
title_fullStr | An open-source framework for synthetic post-dive Doppler ultrasound audio generation |
title_full_unstemmed | An open-source framework for synthetic post-dive Doppler ultrasound audio generation |
title_short | An open-source framework for synthetic post-dive Doppler ultrasound audio generation |
title_sort | open-source framework for synthetic post-dive doppler ultrasound audio generation |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10138468/ https://www.ncbi.nlm.nih.gov/pubmed/37104279 http://dx.doi.org/10.1371/journal.pone.0284922 |
work_keys_str_mv | AT ledavidq anopensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT hoangandrewh anopensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT azarangarian anopensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT lancerachelm anopensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT natolimichael anopensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT gatrellalan anopensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT bloggslesley anopensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT daytonpaula anopensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT tillmansfrauke anopensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT lindholmpeter anopensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT moonricharde anopensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT papadopoulouvirginie anopensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT ledavidq opensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT hoangandrewh opensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT azarangarian opensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT lancerachelm opensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT natolimichael opensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT gatrellalan opensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT bloggslesley opensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT daytonpaula opensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT tillmansfrauke opensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT lindholmpeter opensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT moonricharde opensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration AT papadopoulouvirginie opensourceframeworkforsyntheticpostdivedopplerultrasoundaudiogeneration |