Cargando…
IRAK2, an Immune and Radiation-Response Gene, Correlates with Advanced Disease Features but Predicts Higher Post-Irradiation Local Control in Non-Metastatic and Resected Oral Cancer Patients
Gene Ontology (GO) analysis can provide a comprehensive function analysis for investigating genes, allowing us to identify the potential biological roles of genes. The present study conducted GO analysis to explore the biological function of IRAK2 and performed a case analysis to define its clinical...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10138613/ https://www.ncbi.nlm.nih.gov/pubmed/37108068 http://dx.doi.org/10.3390/ijms24086903 |
_version_ | 1785032748627394560 |
---|---|
author | Yu, Chih-Chia Lin, Hon-Yi Hsieh, Chen-Hsi Chan, Michael W. Y. Chiou, Wen-Yen Lee, Moon-Sing Chi, Chen-Lin Lin, Ru-Inn Hsu, Feng-Chun Chen, Liang-Cheng Chew, Chia-Hui Yang, Hsuan-Ju Hung, Shih-Kai |
author_facet | Yu, Chih-Chia Lin, Hon-Yi Hsieh, Chen-Hsi Chan, Michael W. Y. Chiou, Wen-Yen Lee, Moon-Sing Chi, Chen-Lin Lin, Ru-Inn Hsu, Feng-Chun Chen, Liang-Cheng Chew, Chia-Hui Yang, Hsuan-Ju Hung, Shih-Kai |
author_sort | Yu, Chih-Chia |
collection | PubMed |
description | Gene Ontology (GO) analysis can provide a comprehensive function analysis for investigating genes, allowing us to identify the potential biological roles of genes. The present study conducted GO analysis to explore the biological function of IRAK2 and performed a case analysis to define its clinical role in disease progression and mediating tumor response to RT. Methods: We performed a GO enrichment analysis on the RNA-seq data to validate radiation-induced gene expression. A total of 172 I-IVB specimens from oral squamous cell carcinoma patients were collected for clinical analysis, from which IRAK2 expression was analyzed by immunohistochemistry. This was a retrospective study conducted between IRAK2 expression and the outcomes of oral squamous cell carcinoma patients after radiotherapy treatment. We conducted Gene Ontology (GO) analysis to explore the biological function of IRAK2 and performed a case analysis to define its clinical role in mediating tumor response to radiotherapy. GO enrichment analysis to validate radiation-induced gene expression was performed. Clinically, 172 stage I-IVB resected oral cancer patients were used to validate IRAK2 expression in predicting clinical outcomes. GO enrichment analysis showed that IRAK2 is involved in 10 of the 14 most enriched GO categories for post-irradiation biological processes, focusing on stress response and immune modulation. Clinically, high IRAK2 expression was correlated with adverse disease features, including pT3-4 status (p = 0.01), advanced overall stage (p = 0.02), and positive bone invasion (p = 0.01). In patients who underwent radiotherapy, the IRAK2-high group was associated with reduced post-irradiation local recurrence (p = 0.025) compared to the IRAK2-low group. IRAK2 plays a crucial role in the radiation-induced response. Patients with high IRAK2 expression demonstrated more advanced disease features but predicted higher post-irradiation local control in a clinical setting. These findings support IRAK2 as a potential predictive biomarker for radiotherapy response in non-metastatic and resected oral cancer patients. |
format | Online Article Text |
id | pubmed-10138613 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-101386132023-04-28 IRAK2, an Immune and Radiation-Response Gene, Correlates with Advanced Disease Features but Predicts Higher Post-Irradiation Local Control in Non-Metastatic and Resected Oral Cancer Patients Yu, Chih-Chia Lin, Hon-Yi Hsieh, Chen-Hsi Chan, Michael W. Y. Chiou, Wen-Yen Lee, Moon-Sing Chi, Chen-Lin Lin, Ru-Inn Hsu, Feng-Chun Chen, Liang-Cheng Chew, Chia-Hui Yang, Hsuan-Ju Hung, Shih-Kai Int J Mol Sci Article Gene Ontology (GO) analysis can provide a comprehensive function analysis for investigating genes, allowing us to identify the potential biological roles of genes. The present study conducted GO analysis to explore the biological function of IRAK2 and performed a case analysis to define its clinical role in disease progression and mediating tumor response to RT. Methods: We performed a GO enrichment analysis on the RNA-seq data to validate radiation-induced gene expression. A total of 172 I-IVB specimens from oral squamous cell carcinoma patients were collected for clinical analysis, from which IRAK2 expression was analyzed by immunohistochemistry. This was a retrospective study conducted between IRAK2 expression and the outcomes of oral squamous cell carcinoma patients after radiotherapy treatment. We conducted Gene Ontology (GO) analysis to explore the biological function of IRAK2 and performed a case analysis to define its clinical role in mediating tumor response to radiotherapy. GO enrichment analysis to validate radiation-induced gene expression was performed. Clinically, 172 stage I-IVB resected oral cancer patients were used to validate IRAK2 expression in predicting clinical outcomes. GO enrichment analysis showed that IRAK2 is involved in 10 of the 14 most enriched GO categories for post-irradiation biological processes, focusing on stress response and immune modulation. Clinically, high IRAK2 expression was correlated with adverse disease features, including pT3-4 status (p = 0.01), advanced overall stage (p = 0.02), and positive bone invasion (p = 0.01). In patients who underwent radiotherapy, the IRAK2-high group was associated with reduced post-irradiation local recurrence (p = 0.025) compared to the IRAK2-low group. IRAK2 plays a crucial role in the radiation-induced response. Patients with high IRAK2 expression demonstrated more advanced disease features but predicted higher post-irradiation local control in a clinical setting. These findings support IRAK2 as a potential predictive biomarker for radiotherapy response in non-metastatic and resected oral cancer patients. MDPI 2023-04-07 /pmc/articles/PMC10138613/ /pubmed/37108068 http://dx.doi.org/10.3390/ijms24086903 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Yu, Chih-Chia Lin, Hon-Yi Hsieh, Chen-Hsi Chan, Michael W. Y. Chiou, Wen-Yen Lee, Moon-Sing Chi, Chen-Lin Lin, Ru-Inn Hsu, Feng-Chun Chen, Liang-Cheng Chew, Chia-Hui Yang, Hsuan-Ju Hung, Shih-Kai IRAK2, an Immune and Radiation-Response Gene, Correlates with Advanced Disease Features but Predicts Higher Post-Irradiation Local Control in Non-Metastatic and Resected Oral Cancer Patients |
title | IRAK2, an Immune and Radiation-Response Gene, Correlates with Advanced Disease Features but Predicts Higher Post-Irradiation Local Control in Non-Metastatic and Resected Oral Cancer Patients |
title_full | IRAK2, an Immune and Radiation-Response Gene, Correlates with Advanced Disease Features but Predicts Higher Post-Irradiation Local Control in Non-Metastatic and Resected Oral Cancer Patients |
title_fullStr | IRAK2, an Immune and Radiation-Response Gene, Correlates with Advanced Disease Features but Predicts Higher Post-Irradiation Local Control in Non-Metastatic and Resected Oral Cancer Patients |
title_full_unstemmed | IRAK2, an Immune and Radiation-Response Gene, Correlates with Advanced Disease Features but Predicts Higher Post-Irradiation Local Control in Non-Metastatic and Resected Oral Cancer Patients |
title_short | IRAK2, an Immune and Radiation-Response Gene, Correlates with Advanced Disease Features but Predicts Higher Post-Irradiation Local Control in Non-Metastatic and Resected Oral Cancer Patients |
title_sort | irak2, an immune and radiation-response gene, correlates with advanced disease features but predicts higher post-irradiation local control in non-metastatic and resected oral cancer patients |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10138613/ https://www.ncbi.nlm.nih.gov/pubmed/37108068 http://dx.doi.org/10.3390/ijms24086903 |
work_keys_str_mv | AT yuchihchia irak2animmuneandradiationresponsegenecorrelateswithadvanceddiseasefeaturesbutpredictshigherpostirradiationlocalcontrolinnonmetastaticandresectedoralcancerpatients AT linhonyi irak2animmuneandradiationresponsegenecorrelateswithadvanceddiseasefeaturesbutpredictshigherpostirradiationlocalcontrolinnonmetastaticandresectedoralcancerpatients AT hsiehchenhsi irak2animmuneandradiationresponsegenecorrelateswithadvanceddiseasefeaturesbutpredictshigherpostirradiationlocalcontrolinnonmetastaticandresectedoralcancerpatients AT chanmichaelwy irak2animmuneandradiationresponsegenecorrelateswithadvanceddiseasefeaturesbutpredictshigherpostirradiationlocalcontrolinnonmetastaticandresectedoralcancerpatients AT chiouwenyen irak2animmuneandradiationresponsegenecorrelateswithadvanceddiseasefeaturesbutpredictshigherpostirradiationlocalcontrolinnonmetastaticandresectedoralcancerpatients AT leemoonsing irak2animmuneandradiationresponsegenecorrelateswithadvanceddiseasefeaturesbutpredictshigherpostirradiationlocalcontrolinnonmetastaticandresectedoralcancerpatients AT chichenlin irak2animmuneandradiationresponsegenecorrelateswithadvanceddiseasefeaturesbutpredictshigherpostirradiationlocalcontrolinnonmetastaticandresectedoralcancerpatients AT linruinn irak2animmuneandradiationresponsegenecorrelateswithadvanceddiseasefeaturesbutpredictshigherpostirradiationlocalcontrolinnonmetastaticandresectedoralcancerpatients AT hsufengchun irak2animmuneandradiationresponsegenecorrelateswithadvanceddiseasefeaturesbutpredictshigherpostirradiationlocalcontrolinnonmetastaticandresectedoralcancerpatients AT chenliangcheng irak2animmuneandradiationresponsegenecorrelateswithadvanceddiseasefeaturesbutpredictshigherpostirradiationlocalcontrolinnonmetastaticandresectedoralcancerpatients AT chewchiahui irak2animmuneandradiationresponsegenecorrelateswithadvanceddiseasefeaturesbutpredictshigherpostirradiationlocalcontrolinnonmetastaticandresectedoralcancerpatients AT yanghsuanju irak2animmuneandradiationresponsegenecorrelateswithadvanceddiseasefeaturesbutpredictshigherpostirradiationlocalcontrolinnonmetastaticandresectedoralcancerpatients AT hungshihkai irak2animmuneandradiationresponsegenecorrelateswithadvanceddiseasefeaturesbutpredictshigherpostirradiationlocalcontrolinnonmetastaticandresectedoralcancerpatients |