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A five-safes approach to a secure and scalable genomics data repository

Genomic researchers increasingly utilize commercial cloud service providers (CSPs) to manage data and analytics needs. CSPs allow researchers to grow Information Technology (IT) infrastructure on demand to overcome bottlenecks when combining large datasets. However, without adequate security control...

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Autores principales: Shih, Chih Chuan, Chen, Jieqi, Lee, Ai Shan, Bertin, Nicolas, Hebrard, Maxime, Khor, Chiea Chuen, Li, Zheng, Juan Tan, Joanna Hui, Meah, Wee Yang, Peh, Su Qin, Mok, Shi Qi, Sim, Kar Seng, Liu, Jianjun, Wang, Ling, Wong, Eleanor, Li, Jingmei, Tin, Aung, Cheng, Ching-Yu, Heng, Chew-Kiat, Yuan, Jian-Min, Koh, Woon-Puay, Saw, Seang Mei, Friedlander, Yechiel, Sim, Xueling, Chai, Jin Fang, Chong, Yap Seng, Davila, Sonia, Goh, Liuh Ling, Lee, Eng Sing, Wong, Tien Yin, Karnani, Neerja, Leong, Khai Pang, Yeo, Khung Keong, Chambers, John C., Lim, Su Chi, Goh, Rick Siow Mong, Tan, Patrick, Dorajoo, Rajkumar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10139958/
https://www.ncbi.nlm.nih.gov/pubmed/37123247
http://dx.doi.org/10.1016/j.isci.2023.106546
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author Shih, Chih Chuan
Chen, Jieqi
Lee, Ai Shan
Bertin, Nicolas
Hebrard, Maxime
Khor, Chiea Chuen
Li, Zheng
Juan Tan, Joanna Hui
Meah, Wee Yang
Peh, Su Qin
Mok, Shi Qi
Sim, Kar Seng
Liu, Jianjun
Wang, Ling
Wong, Eleanor
Li, Jingmei
Tin, Aung
Cheng, Ching-Yu
Heng, Chew-Kiat
Yuan, Jian-Min
Koh, Woon-Puay
Saw, Seang Mei
Friedlander, Yechiel
Sim, Xueling
Chai, Jin Fang
Chong, Yap Seng
Davila, Sonia
Goh, Liuh Ling
Lee, Eng Sing
Wong, Tien Yin
Karnani, Neerja
Leong, Khai Pang
Yeo, Khung Keong
Chambers, John C.
Lim, Su Chi
Goh, Rick Siow Mong
Tan, Patrick
Dorajoo, Rajkumar
author_facet Shih, Chih Chuan
Chen, Jieqi
Lee, Ai Shan
Bertin, Nicolas
Hebrard, Maxime
Khor, Chiea Chuen
Li, Zheng
Juan Tan, Joanna Hui
Meah, Wee Yang
Peh, Su Qin
Mok, Shi Qi
Sim, Kar Seng
Liu, Jianjun
Wang, Ling
Wong, Eleanor
Li, Jingmei
Tin, Aung
Cheng, Ching-Yu
Heng, Chew-Kiat
Yuan, Jian-Min
Koh, Woon-Puay
Saw, Seang Mei
Friedlander, Yechiel
Sim, Xueling
Chai, Jin Fang
Chong, Yap Seng
Davila, Sonia
Goh, Liuh Ling
Lee, Eng Sing
Wong, Tien Yin
Karnani, Neerja
Leong, Khai Pang
Yeo, Khung Keong
Chambers, John C.
Lim, Su Chi
Goh, Rick Siow Mong
Tan, Patrick
Dorajoo, Rajkumar
author_sort Shih, Chih Chuan
collection PubMed
description Genomic researchers increasingly utilize commercial cloud service providers (CSPs) to manage data and analytics needs. CSPs allow researchers to grow Information Technology (IT) infrastructure on demand to overcome bottlenecks when combining large datasets. However, without adequate security controls, the risk of unauthorized access may be higher for data stored on the cloud. Additionally, regulators are mandating data access patterns and specific security protocols for the storage and use of genomic data. While CSP provides tools for security and regulatory compliance, building the necessary controls required for cloud solutions is not trivial. Research Assets Provisioning and Tracking Online Repository (RAPTOR) by the Genome Institute of Singapore is a cloud-native genomics data repository and analytics platform that implements a “five-safes” framework to provide security and governance controls to data contributors and users, leveraging CSP for sharing and analysis of genomic datasets without the risk of security breaches or running afoul of regulations.
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spelling pubmed-101399582023-04-29 A five-safes approach to a secure and scalable genomics data repository Shih, Chih Chuan Chen, Jieqi Lee, Ai Shan Bertin, Nicolas Hebrard, Maxime Khor, Chiea Chuen Li, Zheng Juan Tan, Joanna Hui Meah, Wee Yang Peh, Su Qin Mok, Shi Qi Sim, Kar Seng Liu, Jianjun Wang, Ling Wong, Eleanor Li, Jingmei Tin, Aung Cheng, Ching-Yu Heng, Chew-Kiat Yuan, Jian-Min Koh, Woon-Puay Saw, Seang Mei Friedlander, Yechiel Sim, Xueling Chai, Jin Fang Chong, Yap Seng Davila, Sonia Goh, Liuh Ling Lee, Eng Sing Wong, Tien Yin Karnani, Neerja Leong, Khai Pang Yeo, Khung Keong Chambers, John C. Lim, Su Chi Goh, Rick Siow Mong Tan, Patrick Dorajoo, Rajkumar iScience Article Genomic researchers increasingly utilize commercial cloud service providers (CSPs) to manage data and analytics needs. CSPs allow researchers to grow Information Technology (IT) infrastructure on demand to overcome bottlenecks when combining large datasets. However, without adequate security controls, the risk of unauthorized access may be higher for data stored on the cloud. Additionally, regulators are mandating data access patterns and specific security protocols for the storage and use of genomic data. While CSP provides tools for security and regulatory compliance, building the necessary controls required for cloud solutions is not trivial. Research Assets Provisioning and Tracking Online Repository (RAPTOR) by the Genome Institute of Singapore is a cloud-native genomics data repository and analytics platform that implements a “five-safes” framework to provide security and governance controls to data contributors and users, leveraging CSP for sharing and analysis of genomic datasets without the risk of security breaches or running afoul of regulations. Elsevier 2023-03-31 /pmc/articles/PMC10139958/ /pubmed/37123247 http://dx.doi.org/10.1016/j.isci.2023.106546 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Shih, Chih Chuan
Chen, Jieqi
Lee, Ai Shan
Bertin, Nicolas
Hebrard, Maxime
Khor, Chiea Chuen
Li, Zheng
Juan Tan, Joanna Hui
Meah, Wee Yang
Peh, Su Qin
Mok, Shi Qi
Sim, Kar Seng
Liu, Jianjun
Wang, Ling
Wong, Eleanor
Li, Jingmei
Tin, Aung
Cheng, Ching-Yu
Heng, Chew-Kiat
Yuan, Jian-Min
Koh, Woon-Puay
Saw, Seang Mei
Friedlander, Yechiel
Sim, Xueling
Chai, Jin Fang
Chong, Yap Seng
Davila, Sonia
Goh, Liuh Ling
Lee, Eng Sing
Wong, Tien Yin
Karnani, Neerja
Leong, Khai Pang
Yeo, Khung Keong
Chambers, John C.
Lim, Su Chi
Goh, Rick Siow Mong
Tan, Patrick
Dorajoo, Rajkumar
A five-safes approach to a secure and scalable genomics data repository
title A five-safes approach to a secure and scalable genomics data repository
title_full A five-safes approach to a secure and scalable genomics data repository
title_fullStr A five-safes approach to a secure and scalable genomics data repository
title_full_unstemmed A five-safes approach to a secure and scalable genomics data repository
title_short A five-safes approach to a secure and scalable genomics data repository
title_sort five-safes approach to a secure and scalable genomics data repository
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10139958/
https://www.ncbi.nlm.nih.gov/pubmed/37123247
http://dx.doi.org/10.1016/j.isci.2023.106546
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