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HMGN1 enhances CRISPR-directed dual-function A-to-G and C-to-G base editing

C-to-G base editors have been successfully constructed recently, but limited work has been done on concurrent C-to-G and A-to-G base editing. In addition, there is also limited data on how chromatin-associated factors affect the base editing. Here, we test a series of chromatin-associated factors, a...

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Autores principales: Yang, Chao, Ma, Zhenzhen, Wang, Keshan, Dong, Xingxiao, Huang, Meiyu, Li, Yaqiu, Zhu, Xiagu, Li, Ju, Cheng, Zhihui, Bi, Changhao, Zhang, Xueli
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10140177/
https://www.ncbi.nlm.nih.gov/pubmed/37105976
http://dx.doi.org/10.1038/s41467-023-38193-2
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author Yang, Chao
Ma, Zhenzhen
Wang, Keshan
Dong, Xingxiao
Huang, Meiyu
Li, Yaqiu
Zhu, Xiagu
Li, Ju
Cheng, Zhihui
Bi, Changhao
Zhang, Xueli
author_facet Yang, Chao
Ma, Zhenzhen
Wang, Keshan
Dong, Xingxiao
Huang, Meiyu
Li, Yaqiu
Zhu, Xiagu
Li, Ju
Cheng, Zhihui
Bi, Changhao
Zhang, Xueli
author_sort Yang, Chao
collection PubMed
description C-to-G base editors have been successfully constructed recently, but limited work has been done on concurrent C-to-G and A-to-G base editing. In addition, there is also limited data on how chromatin-associated factors affect the base editing. Here, we test a series of chromatin-associated factors, and chromosomal protein HMGN1 was found to enhance the efficiency of both C-to-G and A-to-G base editing. By fusing HMGN1, GBE and ABE to Cas9, we develop a CRISPR-based dual-function A-to-G and C-to-G base editor (GGBE) which is capable of converting simultaneous A and C to G conversion with substantial editing efficiency. Accordingly, the HMGN1 role shown in this work and the resulting GGBE tool further broaden the genome manipulation capacity of CRISPR-directed base editors.
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spelling pubmed-101401772023-04-29 HMGN1 enhances CRISPR-directed dual-function A-to-G and C-to-G base editing Yang, Chao Ma, Zhenzhen Wang, Keshan Dong, Xingxiao Huang, Meiyu Li, Yaqiu Zhu, Xiagu Li, Ju Cheng, Zhihui Bi, Changhao Zhang, Xueli Nat Commun Article C-to-G base editors have been successfully constructed recently, but limited work has been done on concurrent C-to-G and A-to-G base editing. In addition, there is also limited data on how chromatin-associated factors affect the base editing. Here, we test a series of chromatin-associated factors, and chromosomal protein HMGN1 was found to enhance the efficiency of both C-to-G and A-to-G base editing. By fusing HMGN1, GBE and ABE to Cas9, we develop a CRISPR-based dual-function A-to-G and C-to-G base editor (GGBE) which is capable of converting simultaneous A and C to G conversion with substantial editing efficiency. Accordingly, the HMGN1 role shown in this work and the resulting GGBE tool further broaden the genome manipulation capacity of CRISPR-directed base editors. Nature Publishing Group UK 2023-04-27 /pmc/articles/PMC10140177/ /pubmed/37105976 http://dx.doi.org/10.1038/s41467-023-38193-2 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Yang, Chao
Ma, Zhenzhen
Wang, Keshan
Dong, Xingxiao
Huang, Meiyu
Li, Yaqiu
Zhu, Xiagu
Li, Ju
Cheng, Zhihui
Bi, Changhao
Zhang, Xueli
HMGN1 enhances CRISPR-directed dual-function A-to-G and C-to-G base editing
title HMGN1 enhances CRISPR-directed dual-function A-to-G and C-to-G base editing
title_full HMGN1 enhances CRISPR-directed dual-function A-to-G and C-to-G base editing
title_fullStr HMGN1 enhances CRISPR-directed dual-function A-to-G and C-to-G base editing
title_full_unstemmed HMGN1 enhances CRISPR-directed dual-function A-to-G and C-to-G base editing
title_short HMGN1 enhances CRISPR-directed dual-function A-to-G and C-to-G base editing
title_sort hmgn1 enhances crispr-directed dual-function a-to-g and c-to-g base editing
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10140177/
https://www.ncbi.nlm.nih.gov/pubmed/37105976
http://dx.doi.org/10.1038/s41467-023-38193-2
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