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Conserved hierarchical gene regulatory networks for drought and cold stress response in Myrica rubra

Stress response in plant is regulated by a large number of genes co-operating in diverse networks that serve multiple adaptive process. To understand how gene regulatory networks (GRNs) modulating abiotic stress responses, we compare the GRNs underlying drought and cold stresses using samples collec...

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Autores principales: Xu, Weijie, Ren, Haiying, Qi, Xingjiang, Zhang, Shuwen, Yu, Zheping, Xie, Jianbo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10140524/
https://www.ncbi.nlm.nih.gov/pubmed/37123838
http://dx.doi.org/10.3389/fpls.2023.1155504
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author Xu, Weijie
Ren, Haiying
Qi, Xingjiang
Zhang, Shuwen
Yu, Zheping
Xie, Jianbo
author_facet Xu, Weijie
Ren, Haiying
Qi, Xingjiang
Zhang, Shuwen
Yu, Zheping
Xie, Jianbo
author_sort Xu, Weijie
collection PubMed
description Stress response in plant is regulated by a large number of genes co-operating in diverse networks that serve multiple adaptive process. To understand how gene regulatory networks (GRNs) modulating abiotic stress responses, we compare the GRNs underlying drought and cold stresses using samples collected at 4 or 6 h intervals within 48 h in Chinese bayberry (Myrica rubra). We detected 7,583 and 8,840 differentially expressed genes (DEGs) under drought and cold stress respectively, which might be responsive to environmental stresses. Drought- and cold-responsive GRNs, which have been built according to the timing of transcription under both abiotic stresses, have a conserved trans-regulator and a common regulatory network. In both GRNs, basic helix-loop-helix family transcription factor (bHLH) serve as central nodes. MrbHLHp10 transcripts exhibited continuous increase in the two abiotic stresses and acts upstream regulator of ASCORBATE PEROXIDASE (APX) gene. To examine the potential biological functions of MrbHLH10, we generated a transgenic Arabidopsis plant that constitutively overexpresses the MrbHLH10 gene. Compared to wild-type (WT) plants, overexpressing transgenic Arabidopsis plants maintained higher APX activity and biomass accumulation under drought and cold stress. Consistently, RNAi plants had elevated susceptibility to both stresses. Taken together, these results suggested that MrbHLH10 mitigates abiotic stresses through the modulation of ROS scavenging.
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spelling pubmed-101405242023-04-29 Conserved hierarchical gene regulatory networks for drought and cold stress response in Myrica rubra Xu, Weijie Ren, Haiying Qi, Xingjiang Zhang, Shuwen Yu, Zheping Xie, Jianbo Front Plant Sci Plant Science Stress response in plant is regulated by a large number of genes co-operating in diverse networks that serve multiple adaptive process. To understand how gene regulatory networks (GRNs) modulating abiotic stress responses, we compare the GRNs underlying drought and cold stresses using samples collected at 4 or 6 h intervals within 48 h in Chinese bayberry (Myrica rubra). We detected 7,583 and 8,840 differentially expressed genes (DEGs) under drought and cold stress respectively, which might be responsive to environmental stresses. Drought- and cold-responsive GRNs, which have been built according to the timing of transcription under both abiotic stresses, have a conserved trans-regulator and a common regulatory network. In both GRNs, basic helix-loop-helix family transcription factor (bHLH) serve as central nodes. MrbHLHp10 transcripts exhibited continuous increase in the two abiotic stresses and acts upstream regulator of ASCORBATE PEROXIDASE (APX) gene. To examine the potential biological functions of MrbHLH10, we generated a transgenic Arabidopsis plant that constitutively overexpresses the MrbHLH10 gene. Compared to wild-type (WT) plants, overexpressing transgenic Arabidopsis plants maintained higher APX activity and biomass accumulation under drought and cold stress. Consistently, RNAi plants had elevated susceptibility to both stresses. Taken together, these results suggested that MrbHLH10 mitigates abiotic stresses through the modulation of ROS scavenging. Frontiers Media S.A. 2023-04-14 /pmc/articles/PMC10140524/ /pubmed/37123838 http://dx.doi.org/10.3389/fpls.2023.1155504 Text en Copyright © 2023 Xu, Ren, Qi, Zhang, Yu and Xie https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Xu, Weijie
Ren, Haiying
Qi, Xingjiang
Zhang, Shuwen
Yu, Zheping
Xie, Jianbo
Conserved hierarchical gene regulatory networks for drought and cold stress response in Myrica rubra
title Conserved hierarchical gene regulatory networks for drought and cold stress response in Myrica rubra
title_full Conserved hierarchical gene regulatory networks for drought and cold stress response in Myrica rubra
title_fullStr Conserved hierarchical gene regulatory networks for drought and cold stress response in Myrica rubra
title_full_unstemmed Conserved hierarchical gene regulatory networks for drought and cold stress response in Myrica rubra
title_short Conserved hierarchical gene regulatory networks for drought and cold stress response in Myrica rubra
title_sort conserved hierarchical gene regulatory networks for drought and cold stress response in myrica rubra
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10140524/
https://www.ncbi.nlm.nih.gov/pubmed/37123838
http://dx.doi.org/10.3389/fpls.2023.1155504
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