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Development of an artificial intelligence-derived histologic signature associated with adjuvant gemcitabine treatment outcomes in pancreatic cancer
Pancreatic ductal adenocarcinoma (PDAC) has been left behind in the evolution of personalized medicine. Predictive markers of response to therapy are lacking in PDAC despite various histological and transcriptional classification schemes. We report an artificial intelligence (AI) approach to histolo...
Autores principales: | , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10140610/ https://www.ncbi.nlm.nih.gov/pubmed/37044094 http://dx.doi.org/10.1016/j.xcrm.2023.101013 |
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author | Nimgaonkar, Vivek Krishna, Viswesh Krishna, Vrishab Tiu, Ekin Joshi, Anirudh Vrabac, Damir Bhambhvani, Hriday Smith, Katelyn Johansen, Julia S. Makawita, Shalini Musher, Benjamin Mehta, Arnav Hendifar, Andrew Wainberg, Zev Sohal, Davendra Fountzilas, Christos Singhi, Aatur Rajpurkar, Pranav Collisson, Eric A. |
author_facet | Nimgaonkar, Vivek Krishna, Viswesh Krishna, Vrishab Tiu, Ekin Joshi, Anirudh Vrabac, Damir Bhambhvani, Hriday Smith, Katelyn Johansen, Julia S. Makawita, Shalini Musher, Benjamin Mehta, Arnav Hendifar, Andrew Wainberg, Zev Sohal, Davendra Fountzilas, Christos Singhi, Aatur Rajpurkar, Pranav Collisson, Eric A. |
author_sort | Nimgaonkar, Vivek |
collection | PubMed |
description | Pancreatic ductal adenocarcinoma (PDAC) has been left behind in the evolution of personalized medicine. Predictive markers of response to therapy are lacking in PDAC despite various histological and transcriptional classification schemes. We report an artificial intelligence (AI) approach to histologic feature examination that extracts a signature predictive of disease-specific survival (DSS) in patients with PDAC receiving adjuvant gemcitabine. We demonstrate that this AI-generated histologic signature is associated with outcomes following adjuvant gemcitabine, while three previously developed transcriptomic classification systems are not (n = 47). We externally validate this signature in an independent cohort of patients treated with adjuvant gemcitabine (n = 46). Finally, we demonstrate that the signature does not stratify survival outcomes in a third cohort of untreated patients (n = 161), suggesting that the signature is specifically predictive of treatment-related outcomes but is not generally prognostic. This imaging analysis pipeline has promise in the development of actionable markers in other clinical settings where few biomarkers currently exist. |
format | Online Article Text |
id | pubmed-10140610 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-101406102023-04-29 Development of an artificial intelligence-derived histologic signature associated with adjuvant gemcitabine treatment outcomes in pancreatic cancer Nimgaonkar, Vivek Krishna, Viswesh Krishna, Vrishab Tiu, Ekin Joshi, Anirudh Vrabac, Damir Bhambhvani, Hriday Smith, Katelyn Johansen, Julia S. Makawita, Shalini Musher, Benjamin Mehta, Arnav Hendifar, Andrew Wainberg, Zev Sohal, Davendra Fountzilas, Christos Singhi, Aatur Rajpurkar, Pranav Collisson, Eric A. Cell Rep Med Report Pancreatic ductal adenocarcinoma (PDAC) has been left behind in the evolution of personalized medicine. Predictive markers of response to therapy are lacking in PDAC despite various histological and transcriptional classification schemes. We report an artificial intelligence (AI) approach to histologic feature examination that extracts a signature predictive of disease-specific survival (DSS) in patients with PDAC receiving adjuvant gemcitabine. We demonstrate that this AI-generated histologic signature is associated with outcomes following adjuvant gemcitabine, while three previously developed transcriptomic classification systems are not (n = 47). We externally validate this signature in an independent cohort of patients treated with adjuvant gemcitabine (n = 46). Finally, we demonstrate that the signature does not stratify survival outcomes in a third cohort of untreated patients (n = 161), suggesting that the signature is specifically predictive of treatment-related outcomes but is not generally prognostic. This imaging analysis pipeline has promise in the development of actionable markers in other clinical settings where few biomarkers currently exist. Elsevier 2023-04-11 /pmc/articles/PMC10140610/ /pubmed/37044094 http://dx.doi.org/10.1016/j.xcrm.2023.101013 Text en © 2023 Valar Labs, Inc. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Report Nimgaonkar, Vivek Krishna, Viswesh Krishna, Vrishab Tiu, Ekin Joshi, Anirudh Vrabac, Damir Bhambhvani, Hriday Smith, Katelyn Johansen, Julia S. Makawita, Shalini Musher, Benjamin Mehta, Arnav Hendifar, Andrew Wainberg, Zev Sohal, Davendra Fountzilas, Christos Singhi, Aatur Rajpurkar, Pranav Collisson, Eric A. Development of an artificial intelligence-derived histologic signature associated with adjuvant gemcitabine treatment outcomes in pancreatic cancer |
title | Development of an artificial intelligence-derived histologic signature associated with adjuvant gemcitabine treatment outcomes in pancreatic cancer |
title_full | Development of an artificial intelligence-derived histologic signature associated with adjuvant gemcitabine treatment outcomes in pancreatic cancer |
title_fullStr | Development of an artificial intelligence-derived histologic signature associated with adjuvant gemcitabine treatment outcomes in pancreatic cancer |
title_full_unstemmed | Development of an artificial intelligence-derived histologic signature associated with adjuvant gemcitabine treatment outcomes in pancreatic cancer |
title_short | Development of an artificial intelligence-derived histologic signature associated with adjuvant gemcitabine treatment outcomes in pancreatic cancer |
title_sort | development of an artificial intelligence-derived histologic signature associated with adjuvant gemcitabine treatment outcomes in pancreatic cancer |
topic | Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10140610/ https://www.ncbi.nlm.nih.gov/pubmed/37044094 http://dx.doi.org/10.1016/j.xcrm.2023.101013 |
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