Cargando…
Unraveling Bonding Mechanisms and Electronic Structure of Pyridine Oximes on Fe(110) Surface: Deeper Insights from DFT, Molecular Dynamics and SCC-DFT Tight Binding Simulations
The development of corrosion inhibitors with outstanding performance is a never-ending and complex process engaged in by researchers, engineers and practitioners. The computational assessment of organic corrosion inhibitors’ performance is a crucial step towards the design of new task-specific mater...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10141362/ https://www.ncbi.nlm.nih.gov/pubmed/37110779 http://dx.doi.org/10.3390/molecules28083545 |
_version_ | 1785033369436815360 |
---|---|
author | Lgaz, Hassane Lee, Han-seung Kaya, Savaş Salghi, Rachid Ibrahim, Sobhy M. Chafiq, Maryam Bazzi, Lahcen Ko, Young Gun |
author_facet | Lgaz, Hassane Lee, Han-seung Kaya, Savaş Salghi, Rachid Ibrahim, Sobhy M. Chafiq, Maryam Bazzi, Lahcen Ko, Young Gun |
author_sort | Lgaz, Hassane |
collection | PubMed |
description | The development of corrosion inhibitors with outstanding performance is a never-ending and complex process engaged in by researchers, engineers and practitioners. The computational assessment of organic corrosion inhibitors’ performance is a crucial step towards the design of new task-specific materials. Herein, the electronic features, adsorption characteristics and bonding mechanisms of two pyridine oximes, namely 2-pyridylaldoxime (2POH) and 3-pyridylaldoxime (3POH), with the iron surface were investigated using molecular dynamics (MD), and self-consistent-charge density-functional tight-binding (SCC-DFTB) simulations. SCC-DFTB simulations revealed that the 3POH molecule can form covalent bonds with iron atoms in its neutral and protonated states, while the 2POH molecule can only bond with iron through its protonated form, resulting in interaction energies of −2.534, −2.007, −1.897, and −0.007 eV for 3POH, 3POH(+), 2POH(+), and 2POH, respectively. Projected density of states (PDOSs) analysis of pyridines–Fe(110) interactions indicated that pyridine molecules were chemically adsorbed on the iron surface. Quantum chemical calculations (QCCs) revealed that the energy gap and Hard and Soft Acids and Bases (HSAB) principles were efficient in predicting the bonding trend of the molecules investigated with an iron surface. 3POH had the lowest energy gap of 1.706 eV, followed by 3POH(+) (2.806 eV), 2POH(+) (3.121 eV), and 2POH (3.431 eV). In the presence of a simulated solution, MD simulation showed that the neutral and protonated forms of molecules exhibited a parallel adsorption mode on an iron surface. The excellent adsorption properties and corrosion inhibition performance of 3POH may be attributed to its low stability compared to 2POH molecules. |
format | Online Article Text |
id | pubmed-10141362 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-101413622023-04-29 Unraveling Bonding Mechanisms and Electronic Structure of Pyridine Oximes on Fe(110) Surface: Deeper Insights from DFT, Molecular Dynamics and SCC-DFT Tight Binding Simulations Lgaz, Hassane Lee, Han-seung Kaya, Savaş Salghi, Rachid Ibrahim, Sobhy M. Chafiq, Maryam Bazzi, Lahcen Ko, Young Gun Molecules Article The development of corrosion inhibitors with outstanding performance is a never-ending and complex process engaged in by researchers, engineers and practitioners. The computational assessment of organic corrosion inhibitors’ performance is a crucial step towards the design of new task-specific materials. Herein, the electronic features, adsorption characteristics and bonding mechanisms of two pyridine oximes, namely 2-pyridylaldoxime (2POH) and 3-pyridylaldoxime (3POH), with the iron surface were investigated using molecular dynamics (MD), and self-consistent-charge density-functional tight-binding (SCC-DFTB) simulations. SCC-DFTB simulations revealed that the 3POH molecule can form covalent bonds with iron atoms in its neutral and protonated states, while the 2POH molecule can only bond with iron through its protonated form, resulting in interaction energies of −2.534, −2.007, −1.897, and −0.007 eV for 3POH, 3POH(+), 2POH(+), and 2POH, respectively. Projected density of states (PDOSs) analysis of pyridines–Fe(110) interactions indicated that pyridine molecules were chemically adsorbed on the iron surface. Quantum chemical calculations (QCCs) revealed that the energy gap and Hard and Soft Acids and Bases (HSAB) principles were efficient in predicting the bonding trend of the molecules investigated with an iron surface. 3POH had the lowest energy gap of 1.706 eV, followed by 3POH(+) (2.806 eV), 2POH(+) (3.121 eV), and 2POH (3.431 eV). In the presence of a simulated solution, MD simulation showed that the neutral and protonated forms of molecules exhibited a parallel adsorption mode on an iron surface. The excellent adsorption properties and corrosion inhibition performance of 3POH may be attributed to its low stability compared to 2POH molecules. MDPI 2023-04-18 /pmc/articles/PMC10141362/ /pubmed/37110779 http://dx.doi.org/10.3390/molecules28083545 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Lgaz, Hassane Lee, Han-seung Kaya, Savaş Salghi, Rachid Ibrahim, Sobhy M. Chafiq, Maryam Bazzi, Lahcen Ko, Young Gun Unraveling Bonding Mechanisms and Electronic Structure of Pyridine Oximes on Fe(110) Surface: Deeper Insights from DFT, Molecular Dynamics and SCC-DFT Tight Binding Simulations |
title | Unraveling Bonding Mechanisms and Electronic Structure of Pyridine Oximes on Fe(110) Surface: Deeper Insights from DFT, Molecular Dynamics and SCC-DFT Tight Binding Simulations |
title_full | Unraveling Bonding Mechanisms and Electronic Structure of Pyridine Oximes on Fe(110) Surface: Deeper Insights from DFT, Molecular Dynamics and SCC-DFT Tight Binding Simulations |
title_fullStr | Unraveling Bonding Mechanisms and Electronic Structure of Pyridine Oximes on Fe(110) Surface: Deeper Insights from DFT, Molecular Dynamics and SCC-DFT Tight Binding Simulations |
title_full_unstemmed | Unraveling Bonding Mechanisms and Electronic Structure of Pyridine Oximes on Fe(110) Surface: Deeper Insights from DFT, Molecular Dynamics and SCC-DFT Tight Binding Simulations |
title_short | Unraveling Bonding Mechanisms and Electronic Structure of Pyridine Oximes on Fe(110) Surface: Deeper Insights from DFT, Molecular Dynamics and SCC-DFT Tight Binding Simulations |
title_sort | unraveling bonding mechanisms and electronic structure of pyridine oximes on fe(110) surface: deeper insights from dft, molecular dynamics and scc-dft tight binding simulations |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10141362/ https://www.ncbi.nlm.nih.gov/pubmed/37110779 http://dx.doi.org/10.3390/molecules28083545 |
work_keys_str_mv | AT lgazhassane unravelingbondingmechanismsandelectronicstructureofpyridineoximesonfe110surfacedeeperinsightsfromdftmoleculardynamicsandsccdfttightbindingsimulations AT leehanseung unravelingbondingmechanismsandelectronicstructureofpyridineoximesonfe110surfacedeeperinsightsfromdftmoleculardynamicsandsccdfttightbindingsimulations AT kayasavas unravelingbondingmechanismsandelectronicstructureofpyridineoximesonfe110surfacedeeperinsightsfromdftmoleculardynamicsandsccdfttightbindingsimulations AT salghirachid unravelingbondingmechanismsandelectronicstructureofpyridineoximesonfe110surfacedeeperinsightsfromdftmoleculardynamicsandsccdfttightbindingsimulations AT ibrahimsobhym unravelingbondingmechanismsandelectronicstructureofpyridineoximesonfe110surfacedeeperinsightsfromdftmoleculardynamicsandsccdfttightbindingsimulations AT chafiqmaryam unravelingbondingmechanismsandelectronicstructureofpyridineoximesonfe110surfacedeeperinsightsfromdftmoleculardynamicsandsccdfttightbindingsimulations AT bazzilahcen unravelingbondingmechanismsandelectronicstructureofpyridineoximesonfe110surfacedeeperinsightsfromdftmoleculardynamicsandsccdfttightbindingsimulations AT koyounggun unravelingbondingmechanismsandelectronicstructureofpyridineoximesonfe110surfacedeeperinsightsfromdftmoleculardynamicsandsccdfttightbindingsimulations |