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Structural Characteristics and Assembly Mechanisms of Soil Microbial Communities under Water–Salt Gradients in Arid Regions
Exploring the structural characteristics of arid soil microbial communities and their assembly mechanisms is important for understanding the ecological characteristics of arid zone soils and promoting ecological restoration. In this study, we used Illumina high-throughput sequencing technology to st...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10142023/ https://www.ncbi.nlm.nih.gov/pubmed/37110483 http://dx.doi.org/10.3390/microorganisms11041060 |
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author | Yang, Guang Jiang, Lamei Li, Wenjing Li, Eryang Lv, Guanghui |
author_facet | Yang, Guang Jiang, Lamei Li, Wenjing Li, Eryang Lv, Guanghui |
author_sort | Yang, Guang |
collection | PubMed |
description | Exploring the structural characteristics of arid soil microbial communities and their assembly mechanisms is important for understanding the ecological characteristics of arid zone soils and promoting ecological restoration. In this study, we used Illumina high-throughput sequencing technology to study soils in the arid zone of the Lake Ebinur basin, determined the differences among soil microbial community structures in the study area under different water–salt gradients, and investigated the effects of environmental factors on microbial community structure and assembly mechanisms. The results show the following: the microbial community alpha diversity exhibited a significantly higher low water–salt gradient (L) than high water–salt gradient (H) and medium water–salt gradient (M). The pH was most strongly correlated with soil microbial community structure, where the alpha diversity indices of the bacterial community and fungal community were significantly negatively correlated with pH, and the Bray–Curtis distance of bacterial community was significantly positively correlated with pH (p < 0.05). The complexity of bacterial community co-occurrence networks showed a significantly higher L than H and M, and the complexity of fungal community co-occurrence network showed a significantly lower L than H and M. The cooperative relationship of H and M in the co-occurrence networks was stronger than that of the L, and the key species of the microbial co-occurrence network were different under different water–salt gradients. Stochastic processes dominated the assembly mechanism of the microbial community structure of soil, and the explanation rates of deterministic and stochastic processes were different under different water–salt gradients, with the highest explanation rate of stochastic processes on the L accounting for more than 90%. In summary, the soil microbial community structure and assembly mechanisms significantly differed across water–salt gradients, and these findings can help provide a reference for further research on soil microbiology in arid zones. |
format | Online Article Text |
id | pubmed-10142023 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-101420232023-04-29 Structural Characteristics and Assembly Mechanisms of Soil Microbial Communities under Water–Salt Gradients in Arid Regions Yang, Guang Jiang, Lamei Li, Wenjing Li, Eryang Lv, Guanghui Microorganisms Article Exploring the structural characteristics of arid soil microbial communities and their assembly mechanisms is important for understanding the ecological characteristics of arid zone soils and promoting ecological restoration. In this study, we used Illumina high-throughput sequencing technology to study soils in the arid zone of the Lake Ebinur basin, determined the differences among soil microbial community structures in the study area under different water–salt gradients, and investigated the effects of environmental factors on microbial community structure and assembly mechanisms. The results show the following: the microbial community alpha diversity exhibited a significantly higher low water–salt gradient (L) than high water–salt gradient (H) and medium water–salt gradient (M). The pH was most strongly correlated with soil microbial community structure, where the alpha diversity indices of the bacterial community and fungal community were significantly negatively correlated with pH, and the Bray–Curtis distance of bacterial community was significantly positively correlated with pH (p < 0.05). The complexity of bacterial community co-occurrence networks showed a significantly higher L than H and M, and the complexity of fungal community co-occurrence network showed a significantly lower L than H and M. The cooperative relationship of H and M in the co-occurrence networks was stronger than that of the L, and the key species of the microbial co-occurrence network were different under different water–salt gradients. Stochastic processes dominated the assembly mechanism of the microbial community structure of soil, and the explanation rates of deterministic and stochastic processes were different under different water–salt gradients, with the highest explanation rate of stochastic processes on the L accounting for more than 90%. In summary, the soil microbial community structure and assembly mechanisms significantly differed across water–salt gradients, and these findings can help provide a reference for further research on soil microbiology in arid zones. MDPI 2023-04-18 /pmc/articles/PMC10142023/ /pubmed/37110483 http://dx.doi.org/10.3390/microorganisms11041060 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Yang, Guang Jiang, Lamei Li, Wenjing Li, Eryang Lv, Guanghui Structural Characteristics and Assembly Mechanisms of Soil Microbial Communities under Water–Salt Gradients in Arid Regions |
title | Structural Characteristics and Assembly Mechanisms of Soil Microbial Communities under Water–Salt Gradients in Arid Regions |
title_full | Structural Characteristics and Assembly Mechanisms of Soil Microbial Communities under Water–Salt Gradients in Arid Regions |
title_fullStr | Structural Characteristics and Assembly Mechanisms of Soil Microbial Communities under Water–Salt Gradients in Arid Regions |
title_full_unstemmed | Structural Characteristics and Assembly Mechanisms of Soil Microbial Communities under Water–Salt Gradients in Arid Regions |
title_short | Structural Characteristics and Assembly Mechanisms of Soil Microbial Communities under Water–Salt Gradients in Arid Regions |
title_sort | structural characteristics and assembly mechanisms of soil microbial communities under water–salt gradients in arid regions |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10142023/ https://www.ncbi.nlm.nih.gov/pubmed/37110483 http://dx.doi.org/10.3390/microorganisms11041060 |
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