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CORAL Models for Drug-Induced Nephrotoxicity
Drug-induced nephrotoxicity is a major cause of kidney dysfunction with potentially fatal consequences. The poor prediction of clinical responses based on preclinical research hampers the development of new pharmaceuticals. This emphasises the need for new methods for earlier and more accurate diagn...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10142465/ https://www.ncbi.nlm.nih.gov/pubmed/37112520 http://dx.doi.org/10.3390/toxics11040293 |
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author | Toropov, Andrey A. Barnes, Devon A. Toropova, Alla P. Roncaglioni, Alessandra Irvine, Alasdair R. Masereeuw, Rosalinde Benfenati, Emilio |
author_facet | Toropov, Andrey A. Barnes, Devon A. Toropova, Alla P. Roncaglioni, Alessandra Irvine, Alasdair R. Masereeuw, Rosalinde Benfenati, Emilio |
author_sort | Toropov, Andrey A. |
collection | PubMed |
description | Drug-induced nephrotoxicity is a major cause of kidney dysfunction with potentially fatal consequences. The poor prediction of clinical responses based on preclinical research hampers the development of new pharmaceuticals. This emphasises the need for new methods for earlier and more accurate diagnosis to avoid drug-induced kidney injuries. Computational predictions of drug-induced nephrotoxicity are an attractive approach to facilitate such an assessment and such models could serve as robust and reliable replacements for animal testing. To provide the chemical information for computational prediction, we used the convenient and common SMILES format. We examined several versions of so-called optimal SMILES-based descriptors. We obtained the highest statistical values, considering the specificity, sensitivity and accuracy of the prediction, by applying recently suggested atoms pairs proportions vectors and the index of ideality of correlation, which is a special statistical measure of the predictive potential. Implementation of this tool in the drug development process might lead to safer drugs in the future. |
format | Online Article Text |
id | pubmed-10142465 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-101424652023-04-29 CORAL Models for Drug-Induced Nephrotoxicity Toropov, Andrey A. Barnes, Devon A. Toropova, Alla P. Roncaglioni, Alessandra Irvine, Alasdair R. Masereeuw, Rosalinde Benfenati, Emilio Toxics Article Drug-induced nephrotoxicity is a major cause of kidney dysfunction with potentially fatal consequences. The poor prediction of clinical responses based on preclinical research hampers the development of new pharmaceuticals. This emphasises the need for new methods for earlier and more accurate diagnosis to avoid drug-induced kidney injuries. Computational predictions of drug-induced nephrotoxicity are an attractive approach to facilitate such an assessment and such models could serve as robust and reliable replacements for animal testing. To provide the chemical information for computational prediction, we used the convenient and common SMILES format. We examined several versions of so-called optimal SMILES-based descriptors. We obtained the highest statistical values, considering the specificity, sensitivity and accuracy of the prediction, by applying recently suggested atoms pairs proportions vectors and the index of ideality of correlation, which is a special statistical measure of the predictive potential. Implementation of this tool in the drug development process might lead to safer drugs in the future. MDPI 2023-03-23 /pmc/articles/PMC10142465/ /pubmed/37112520 http://dx.doi.org/10.3390/toxics11040293 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Toropov, Andrey A. Barnes, Devon A. Toropova, Alla P. Roncaglioni, Alessandra Irvine, Alasdair R. Masereeuw, Rosalinde Benfenati, Emilio CORAL Models for Drug-Induced Nephrotoxicity |
title | CORAL Models for Drug-Induced Nephrotoxicity |
title_full | CORAL Models for Drug-Induced Nephrotoxicity |
title_fullStr | CORAL Models for Drug-Induced Nephrotoxicity |
title_full_unstemmed | CORAL Models for Drug-Induced Nephrotoxicity |
title_short | CORAL Models for Drug-Induced Nephrotoxicity |
title_sort | coral models for drug-induced nephrotoxicity |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10142465/ https://www.ncbi.nlm.nih.gov/pubmed/37112520 http://dx.doi.org/10.3390/toxics11040293 |
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