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Low-Cost Hyperspectral Imaging to Detect Drought Stress in High-Throughput Phenotyping

Recent developments in low-cost imaging hyperspectral cameras have opened up new possibilities for high-throughput phenotyping (HTP), allowing for high-resolution spectral data to be obtained in the visible and near-infrared spectral range. This study presents, for the first time, the integration of...

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Autores principales: Genangeli, Andrea, Avola, Giovanni, Bindi, Marco, Cantini, Claudio, Cellini, Francesco, Grillo, Stefania, Petrozza, Angelo, Riggi, Ezio, Ruggiero, Alessandra, Summerer, Stephan, Tedeschi, Anna, Gioli, Beniamino
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10143644/
https://www.ncbi.nlm.nih.gov/pubmed/37111953
http://dx.doi.org/10.3390/plants12081730
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author Genangeli, Andrea
Avola, Giovanni
Bindi, Marco
Cantini, Claudio
Cellini, Francesco
Grillo, Stefania
Petrozza, Angelo
Riggi, Ezio
Ruggiero, Alessandra
Summerer, Stephan
Tedeschi, Anna
Gioli, Beniamino
author_facet Genangeli, Andrea
Avola, Giovanni
Bindi, Marco
Cantini, Claudio
Cellini, Francesco
Grillo, Stefania
Petrozza, Angelo
Riggi, Ezio
Ruggiero, Alessandra
Summerer, Stephan
Tedeschi, Anna
Gioli, Beniamino
author_sort Genangeli, Andrea
collection PubMed
description Recent developments in low-cost imaging hyperspectral cameras have opened up new possibilities for high-throughput phenotyping (HTP), allowing for high-resolution spectral data to be obtained in the visible and near-infrared spectral range. This study presents, for the first time, the integration of a low-cost hyperspectral camera Senop HSC-2 into an HTP platform to evaluate the drought stress resistance and physiological response of four tomato genotypes (770P, 990P, Red Setter and Torremaggiore) during two cycles of well-watered and deficit irrigation. Over 120 gigabytes of hyperspectral data were collected, and an innovative segmentation method able to reduce the hyperspectral dataset by 85.5% was developed and applied. A hyperspectral index (H-index) based on the red-edge slope was selected, and its ability to discriminate stress conditions was compared with three optical indices (OIs) obtained by the HTP platform. The analysis of variance (ANOVA) applied to the OIs and H-index revealed the better capacity of the H-index to describe the dynamic of drought stress trend compared to OIs, especially in the first stress and recovery phases. Selected OIs were instead capable of describing structural changes during plant growth. Finally, the OIs and H-index results have revealed a higher susceptibility to drought stress in 770P and 990P than Red Setter and Torremaggiore genotypes.
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spelling pubmed-101436442023-04-29 Low-Cost Hyperspectral Imaging to Detect Drought Stress in High-Throughput Phenotyping Genangeli, Andrea Avola, Giovanni Bindi, Marco Cantini, Claudio Cellini, Francesco Grillo, Stefania Petrozza, Angelo Riggi, Ezio Ruggiero, Alessandra Summerer, Stephan Tedeschi, Anna Gioli, Beniamino Plants (Basel) Article Recent developments in low-cost imaging hyperspectral cameras have opened up new possibilities for high-throughput phenotyping (HTP), allowing for high-resolution spectral data to be obtained in the visible and near-infrared spectral range. This study presents, for the first time, the integration of a low-cost hyperspectral camera Senop HSC-2 into an HTP platform to evaluate the drought stress resistance and physiological response of four tomato genotypes (770P, 990P, Red Setter and Torremaggiore) during two cycles of well-watered and deficit irrigation. Over 120 gigabytes of hyperspectral data were collected, and an innovative segmentation method able to reduce the hyperspectral dataset by 85.5% was developed and applied. A hyperspectral index (H-index) based on the red-edge slope was selected, and its ability to discriminate stress conditions was compared with three optical indices (OIs) obtained by the HTP platform. The analysis of variance (ANOVA) applied to the OIs and H-index revealed the better capacity of the H-index to describe the dynamic of drought stress trend compared to OIs, especially in the first stress and recovery phases. Selected OIs were instead capable of describing structural changes during plant growth. Finally, the OIs and H-index results have revealed a higher susceptibility to drought stress in 770P and 990P than Red Setter and Torremaggiore genotypes. MDPI 2023-04-21 /pmc/articles/PMC10143644/ /pubmed/37111953 http://dx.doi.org/10.3390/plants12081730 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Genangeli, Andrea
Avola, Giovanni
Bindi, Marco
Cantini, Claudio
Cellini, Francesco
Grillo, Stefania
Petrozza, Angelo
Riggi, Ezio
Ruggiero, Alessandra
Summerer, Stephan
Tedeschi, Anna
Gioli, Beniamino
Low-Cost Hyperspectral Imaging to Detect Drought Stress in High-Throughput Phenotyping
title Low-Cost Hyperspectral Imaging to Detect Drought Stress in High-Throughput Phenotyping
title_full Low-Cost Hyperspectral Imaging to Detect Drought Stress in High-Throughput Phenotyping
title_fullStr Low-Cost Hyperspectral Imaging to Detect Drought Stress in High-Throughput Phenotyping
title_full_unstemmed Low-Cost Hyperspectral Imaging to Detect Drought Stress in High-Throughput Phenotyping
title_short Low-Cost Hyperspectral Imaging to Detect Drought Stress in High-Throughput Phenotyping
title_sort low-cost hyperspectral imaging to detect drought stress in high-throughput phenotyping
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10143644/
https://www.ncbi.nlm.nih.gov/pubmed/37111953
http://dx.doi.org/10.3390/plants12081730
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