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Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine

Earlier, we demonstrated the co-circulation of genetically distinct non-rodent-borne hantaviruses, including Boginia virus (BOGV) in the Eurasian water shrew (Neomys fodiens), Seewis virus (SWSV) in the Eurasian common shrew (Sorex araneus) and Nova virus (NVAV) in the European mole (Talpa europaea)...

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Autores principales: Kikuchi, Fuka, Arai, Satoru, Hejduk, Janusz, Hayashi, Ai, Markowski, Janusz, Markowski, Marcin, Rychlik, Leszek, Khodzinskyi, Vasyl, Kamiya, Hajime, Mizutani, Tetsuya, Suzuki, Motoi, Sikorska, Beata, Liberski, Paweł P., Yanagihara, Richard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10145205/
https://www.ncbi.nlm.nih.gov/pubmed/37112861
http://dx.doi.org/10.3390/v15040881
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author Kikuchi, Fuka
Arai, Satoru
Hejduk, Janusz
Hayashi, Ai
Markowski, Janusz
Markowski, Marcin
Rychlik, Leszek
Khodzinskyi, Vasyl
Kamiya, Hajime
Mizutani, Tetsuya
Suzuki, Motoi
Sikorska, Beata
Liberski, Paweł P.
Yanagihara, Richard
author_facet Kikuchi, Fuka
Arai, Satoru
Hejduk, Janusz
Hayashi, Ai
Markowski, Janusz
Markowski, Marcin
Rychlik, Leszek
Khodzinskyi, Vasyl
Kamiya, Hajime
Mizutani, Tetsuya
Suzuki, Motoi
Sikorska, Beata
Liberski, Paweł P.
Yanagihara, Richard
author_sort Kikuchi, Fuka
collection PubMed
description Earlier, we demonstrated the co-circulation of genetically distinct non-rodent-borne hantaviruses, including Boginia virus (BOGV) in the Eurasian water shrew (Neomys fodiens), Seewis virus (SWSV) in the Eurasian common shrew (Sorex araneus) and Nova virus (NVAV) in the European mole (Talpa europaea), in central Poland. To further investigate the phylogeny of hantaviruses harbored by soricid and talpid reservoir hosts, we analyzed RNAlater(®)-preserved lung tissues from 320 shrews and 26 moles, both captured during 1990–2017 across Poland, and 10 European moles from Ukraine for hantavirus RNA through RT-PCR and DNA sequencing. SWSV and Altai virus (ALTV) were detected in Sorex araneus and Sorex minutus in Boginia and the Białowieża Forest, respectively, and NVAV was detected in Talpa europaea in Huta Dłutowska, Poland, and in Lviv, Ukraine. Phylogenetic analyses using maximum-likelihood and Bayesian methods showed geography-specific lineages of SWSV in Poland and elsewhere in Eurasia and of NVAV in Poland and Ukraine. The ATLV strain in Sorex minutus from the Białowieża Forest on the Polish–Belarusian border was distantly related to the ATLV strain previously reported in Sorex minutus from Chmiel in southeastern Poland. Overall, the gene phylogenies found support long-standing host-specific adaptation.
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spelling pubmed-101452052023-04-29 Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine Kikuchi, Fuka Arai, Satoru Hejduk, Janusz Hayashi, Ai Markowski, Janusz Markowski, Marcin Rychlik, Leszek Khodzinskyi, Vasyl Kamiya, Hajime Mizutani, Tetsuya Suzuki, Motoi Sikorska, Beata Liberski, Paweł P. Yanagihara, Richard Viruses Article Earlier, we demonstrated the co-circulation of genetically distinct non-rodent-borne hantaviruses, including Boginia virus (BOGV) in the Eurasian water shrew (Neomys fodiens), Seewis virus (SWSV) in the Eurasian common shrew (Sorex araneus) and Nova virus (NVAV) in the European mole (Talpa europaea), in central Poland. To further investigate the phylogeny of hantaviruses harbored by soricid and talpid reservoir hosts, we analyzed RNAlater(®)-preserved lung tissues from 320 shrews and 26 moles, both captured during 1990–2017 across Poland, and 10 European moles from Ukraine for hantavirus RNA through RT-PCR and DNA sequencing. SWSV and Altai virus (ALTV) were detected in Sorex araneus and Sorex minutus in Boginia and the Białowieża Forest, respectively, and NVAV was detected in Talpa europaea in Huta Dłutowska, Poland, and in Lviv, Ukraine. Phylogenetic analyses using maximum-likelihood and Bayesian methods showed geography-specific lineages of SWSV in Poland and elsewhere in Eurasia and of NVAV in Poland and Ukraine. The ATLV strain in Sorex minutus from the Białowieża Forest on the Polish–Belarusian border was distantly related to the ATLV strain previously reported in Sorex minutus from Chmiel in southeastern Poland. Overall, the gene phylogenies found support long-standing host-specific adaptation. MDPI 2023-03-29 /pmc/articles/PMC10145205/ /pubmed/37112861 http://dx.doi.org/10.3390/v15040881 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Kikuchi, Fuka
Arai, Satoru
Hejduk, Janusz
Hayashi, Ai
Markowski, Janusz
Markowski, Marcin
Rychlik, Leszek
Khodzinskyi, Vasyl
Kamiya, Hajime
Mizutani, Tetsuya
Suzuki, Motoi
Sikorska, Beata
Liberski, Paweł P.
Yanagihara, Richard
Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine
title Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine
title_full Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine
title_fullStr Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine
title_full_unstemmed Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine
title_short Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine
title_sort phylogeny of shrew- and mole-borne hantaviruses in poland and ukraine
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10145205/
https://www.ncbi.nlm.nih.gov/pubmed/37112861
http://dx.doi.org/10.3390/v15040881
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