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Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine
Earlier, we demonstrated the co-circulation of genetically distinct non-rodent-borne hantaviruses, including Boginia virus (BOGV) in the Eurasian water shrew (Neomys fodiens), Seewis virus (SWSV) in the Eurasian common shrew (Sorex araneus) and Nova virus (NVAV) in the European mole (Talpa europaea)...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10145205/ https://www.ncbi.nlm.nih.gov/pubmed/37112861 http://dx.doi.org/10.3390/v15040881 |
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author | Kikuchi, Fuka Arai, Satoru Hejduk, Janusz Hayashi, Ai Markowski, Janusz Markowski, Marcin Rychlik, Leszek Khodzinskyi, Vasyl Kamiya, Hajime Mizutani, Tetsuya Suzuki, Motoi Sikorska, Beata Liberski, Paweł P. Yanagihara, Richard |
author_facet | Kikuchi, Fuka Arai, Satoru Hejduk, Janusz Hayashi, Ai Markowski, Janusz Markowski, Marcin Rychlik, Leszek Khodzinskyi, Vasyl Kamiya, Hajime Mizutani, Tetsuya Suzuki, Motoi Sikorska, Beata Liberski, Paweł P. Yanagihara, Richard |
author_sort | Kikuchi, Fuka |
collection | PubMed |
description | Earlier, we demonstrated the co-circulation of genetically distinct non-rodent-borne hantaviruses, including Boginia virus (BOGV) in the Eurasian water shrew (Neomys fodiens), Seewis virus (SWSV) in the Eurasian common shrew (Sorex araneus) and Nova virus (NVAV) in the European mole (Talpa europaea), in central Poland. To further investigate the phylogeny of hantaviruses harbored by soricid and talpid reservoir hosts, we analyzed RNAlater(®)-preserved lung tissues from 320 shrews and 26 moles, both captured during 1990–2017 across Poland, and 10 European moles from Ukraine for hantavirus RNA through RT-PCR and DNA sequencing. SWSV and Altai virus (ALTV) were detected in Sorex araneus and Sorex minutus in Boginia and the Białowieża Forest, respectively, and NVAV was detected in Talpa europaea in Huta Dłutowska, Poland, and in Lviv, Ukraine. Phylogenetic analyses using maximum-likelihood and Bayesian methods showed geography-specific lineages of SWSV in Poland and elsewhere in Eurasia and of NVAV in Poland and Ukraine. The ATLV strain in Sorex minutus from the Białowieża Forest on the Polish–Belarusian border was distantly related to the ATLV strain previously reported in Sorex minutus from Chmiel in southeastern Poland. Overall, the gene phylogenies found support long-standing host-specific adaptation. |
format | Online Article Text |
id | pubmed-10145205 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-101452052023-04-29 Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine Kikuchi, Fuka Arai, Satoru Hejduk, Janusz Hayashi, Ai Markowski, Janusz Markowski, Marcin Rychlik, Leszek Khodzinskyi, Vasyl Kamiya, Hajime Mizutani, Tetsuya Suzuki, Motoi Sikorska, Beata Liberski, Paweł P. Yanagihara, Richard Viruses Article Earlier, we demonstrated the co-circulation of genetically distinct non-rodent-borne hantaviruses, including Boginia virus (BOGV) in the Eurasian water shrew (Neomys fodiens), Seewis virus (SWSV) in the Eurasian common shrew (Sorex araneus) and Nova virus (NVAV) in the European mole (Talpa europaea), in central Poland. To further investigate the phylogeny of hantaviruses harbored by soricid and talpid reservoir hosts, we analyzed RNAlater(®)-preserved lung tissues from 320 shrews and 26 moles, both captured during 1990–2017 across Poland, and 10 European moles from Ukraine for hantavirus RNA through RT-PCR and DNA sequencing. SWSV and Altai virus (ALTV) were detected in Sorex araneus and Sorex minutus in Boginia and the Białowieża Forest, respectively, and NVAV was detected in Talpa europaea in Huta Dłutowska, Poland, and in Lviv, Ukraine. Phylogenetic analyses using maximum-likelihood and Bayesian methods showed geography-specific lineages of SWSV in Poland and elsewhere in Eurasia and of NVAV in Poland and Ukraine. The ATLV strain in Sorex minutus from the Białowieża Forest on the Polish–Belarusian border was distantly related to the ATLV strain previously reported in Sorex minutus from Chmiel in southeastern Poland. Overall, the gene phylogenies found support long-standing host-specific adaptation. MDPI 2023-03-29 /pmc/articles/PMC10145205/ /pubmed/37112861 http://dx.doi.org/10.3390/v15040881 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Kikuchi, Fuka Arai, Satoru Hejduk, Janusz Hayashi, Ai Markowski, Janusz Markowski, Marcin Rychlik, Leszek Khodzinskyi, Vasyl Kamiya, Hajime Mizutani, Tetsuya Suzuki, Motoi Sikorska, Beata Liberski, Paweł P. Yanagihara, Richard Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine |
title | Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine |
title_full | Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine |
title_fullStr | Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine |
title_full_unstemmed | Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine |
title_short | Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine |
title_sort | phylogeny of shrew- and mole-borne hantaviruses in poland and ukraine |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10145205/ https://www.ncbi.nlm.nih.gov/pubmed/37112861 http://dx.doi.org/10.3390/v15040881 |
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