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Genetic polymorphism between the Sorani and Hawrami kurdish populations and COVID-19 outcome

BACKGROUND: Coronavirus Disease 2019 (COVID-19) is a global pandemic, and mortality and clinical consequences vary across countries. One of the factors influencing COVID-19 outcomes is genetic polymorphism. Two Kurdish populations, Sorani and Hawrami, live in the Sulaimani province of the Kurdistan...

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Autores principales: Rashid, Peshnyar M.A., Salih, Gaza F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10148000/
https://www.ncbi.nlm.nih.gov/pubmed/37119412
http://dx.doi.org/10.1007/s11033-023-08448-8
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author Rashid, Peshnyar M.A.
Salih, Gaza F.
author_facet Rashid, Peshnyar M.A.
Salih, Gaza F.
author_sort Rashid, Peshnyar M.A.
collection PubMed
description BACKGROUND: Coronavirus Disease 2019 (COVID-19) is a global pandemic, and mortality and clinical consequences vary across countries. One of the factors influencing COVID-19 outcomes is genetic polymorphism. Two Kurdish populations, Sorani and Hawrami, live in the Sulaimani province of the Kurdistan Region of Iraq. It seems Hawrami had a milder COVID-19 outcome. According to previous research conducted on various ethnic groups across the globe, single nucleotide polymorphisms (SNPs) in the interferon-induced transmembrane protein 3 (IFITM3) and interluken-6 (IL6) genes were associated with the severity of COVID-19 in those populations. METHODS AND RESULTS: We hypothesized that Hawrami may have protective SNPs. So, in this study, we used DNA sequencing to genotype three IFITM3 SNPs and nine IL6 SNPs by DNA sequencing to investigate the association of Sorani and Hawrami population polymorphisms. Genotype AA for the rs12252 SNP in IFITM3 was insignificantly more common in the Sorani group (54% vs. 44%). The Hawrami population showed a higher percentage of the CC genotype of the rs34481144 SNP in the IFITM3 gene (62% vs. 44.3%) and a higher proportion of the non-risky GG genotype of the rs1800795 SNP in the IL6 gene (53.4 vs. 43.3); however, the SNPs were insignificantly associated between the two populations. CONCLUSIONS: IFITM3 and IL6 SNPs have no statistically significant association between the two Kurdish populations. The decreased proportion of non-risk alleles at rs34481144 and rs1800795 in the Hawrami population may partially support the research hypothesis. However, contrary to our hypothesis, the Sorani group had an insignificantly higher protective variant of the rs12252 SNP. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11033-023-08448-8.
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spelling pubmed-101480002023-05-01 Genetic polymorphism between the Sorani and Hawrami kurdish populations and COVID-19 outcome Rashid, Peshnyar M.A. Salih, Gaza F. Mol Biol Rep Original Article BACKGROUND: Coronavirus Disease 2019 (COVID-19) is a global pandemic, and mortality and clinical consequences vary across countries. One of the factors influencing COVID-19 outcomes is genetic polymorphism. Two Kurdish populations, Sorani and Hawrami, live in the Sulaimani province of the Kurdistan Region of Iraq. It seems Hawrami had a milder COVID-19 outcome. According to previous research conducted on various ethnic groups across the globe, single nucleotide polymorphisms (SNPs) in the interferon-induced transmembrane protein 3 (IFITM3) and interluken-6 (IL6) genes were associated with the severity of COVID-19 in those populations. METHODS AND RESULTS: We hypothesized that Hawrami may have protective SNPs. So, in this study, we used DNA sequencing to genotype three IFITM3 SNPs and nine IL6 SNPs by DNA sequencing to investigate the association of Sorani and Hawrami population polymorphisms. Genotype AA for the rs12252 SNP in IFITM3 was insignificantly more common in the Sorani group (54% vs. 44%). The Hawrami population showed a higher percentage of the CC genotype of the rs34481144 SNP in the IFITM3 gene (62% vs. 44.3%) and a higher proportion of the non-risky GG genotype of the rs1800795 SNP in the IL6 gene (53.4 vs. 43.3); however, the SNPs were insignificantly associated between the two populations. CONCLUSIONS: IFITM3 and IL6 SNPs have no statistically significant association between the two Kurdish populations. The decreased proportion of non-risk alleles at rs34481144 and rs1800795 in the Hawrami population may partially support the research hypothesis. However, contrary to our hypothesis, the Sorani group had an insignificantly higher protective variant of the rs12252 SNP. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11033-023-08448-8. Springer Netherlands 2023-04-29 2023 /pmc/articles/PMC10148000/ /pubmed/37119412 http://dx.doi.org/10.1007/s11033-023-08448-8 Text en © The Author(s), under exclusive licence to Springer Nature B.V. 2023, Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Original Article
Rashid, Peshnyar M.A.
Salih, Gaza F.
Genetic polymorphism between the Sorani and Hawrami kurdish populations and COVID-19 outcome
title Genetic polymorphism between the Sorani and Hawrami kurdish populations and COVID-19 outcome
title_full Genetic polymorphism between the Sorani and Hawrami kurdish populations and COVID-19 outcome
title_fullStr Genetic polymorphism between the Sorani and Hawrami kurdish populations and COVID-19 outcome
title_full_unstemmed Genetic polymorphism between the Sorani and Hawrami kurdish populations and COVID-19 outcome
title_short Genetic polymorphism between the Sorani and Hawrami kurdish populations and COVID-19 outcome
title_sort genetic polymorphism between the sorani and hawrami kurdish populations and covid-19 outcome
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10148000/
https://www.ncbi.nlm.nih.gov/pubmed/37119412
http://dx.doi.org/10.1007/s11033-023-08448-8
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