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Using bioinformatics technology to mine the expression of serum exosomal miRNA in patients with traumatic brain injury

INTRODUCTION: Traumatic brain injury (TBI) is considered the most common traumatic neurological disease, is associated with high mortality and long-term complications, and is a global public health issue. However, there has been little progress in serum markers for TBI research. Therefore, there is...

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Autores principales: Huang, Xintao, Xu, Xinjuan, Wang, Ce, Wang, Yi, Yang, Yajun, Yao, Tianle, Bai, Rui, Pei, Xile, Bai, Feirong, Li, Panpan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10151740/
https://www.ncbi.nlm.nih.gov/pubmed/37144089
http://dx.doi.org/10.3389/fnins.2023.1145307
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author Huang, Xintao
Xu, Xinjuan
Wang, Ce
Wang, Yi
Yang, Yajun
Yao, Tianle
Bai, Rui
Pei, Xile
Bai, Feirong
Li, Panpan
author_facet Huang, Xintao
Xu, Xinjuan
Wang, Ce
Wang, Yi
Yang, Yajun
Yao, Tianle
Bai, Rui
Pei, Xile
Bai, Feirong
Li, Panpan
author_sort Huang, Xintao
collection PubMed
description INTRODUCTION: Traumatic brain injury (TBI) is considered the most common traumatic neurological disease, is associated with high mortality and long-term complications, and is a global public health issue. However, there has been little progress in serum markers for TBI research. Therefore, there is an urgent need for biomarkers that can sufficiently function in TBI diagnosis and evaluation. METHODS: Exosomal microRNA (ExomiR), a stable circulating marker in the serum, has aroused widespread interest among researchers. To explore the level of serum ExomiR after TBI, we quantified ExomiR expression levels in serum exosomes extracted from patients with TBI using next-generation sequencing (NGS) and explored potential biomarkers using bioinformatics screening. RESULTS: Compared with the control group, there were 245 ExomiR (136 up-regulated and 109 down-regulated) in the serum of the TBI group that changed significantly. We observed serum ExomiRs expression profiles associated with neurovascular remodeling, the integrity of the blood-brain barrier, neuroinflammation, and a cascade of secondary injury, including eight up-regulated ExomiRs (ExomiR-124-3p, ExomiR-137-3p, ExomiR-9-3p, ExomiR-133a-5p, ExomiR-204-3p, ExomiR-519a-5p, ExomiR-4732-5p, and ExomiR-206) and 2 down-regulated ExomiR (ExomiR-21-3p and ExomiR-199a-5). DISCUSSION: The results revealed that serum ExomiRs might become a new research direction and breakthrough for the diagnosis and pathophysiological treatment of patients with TBI.
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spelling pubmed-101517402023-05-03 Using bioinformatics technology to mine the expression of serum exosomal miRNA in patients with traumatic brain injury Huang, Xintao Xu, Xinjuan Wang, Ce Wang, Yi Yang, Yajun Yao, Tianle Bai, Rui Pei, Xile Bai, Feirong Li, Panpan Front Neurosci Neuroscience INTRODUCTION: Traumatic brain injury (TBI) is considered the most common traumatic neurological disease, is associated with high mortality and long-term complications, and is a global public health issue. However, there has been little progress in serum markers for TBI research. Therefore, there is an urgent need for biomarkers that can sufficiently function in TBI diagnosis and evaluation. METHODS: Exosomal microRNA (ExomiR), a stable circulating marker in the serum, has aroused widespread interest among researchers. To explore the level of serum ExomiR after TBI, we quantified ExomiR expression levels in serum exosomes extracted from patients with TBI using next-generation sequencing (NGS) and explored potential biomarkers using bioinformatics screening. RESULTS: Compared with the control group, there were 245 ExomiR (136 up-regulated and 109 down-regulated) in the serum of the TBI group that changed significantly. We observed serum ExomiRs expression profiles associated with neurovascular remodeling, the integrity of the blood-brain barrier, neuroinflammation, and a cascade of secondary injury, including eight up-regulated ExomiRs (ExomiR-124-3p, ExomiR-137-3p, ExomiR-9-3p, ExomiR-133a-5p, ExomiR-204-3p, ExomiR-519a-5p, ExomiR-4732-5p, and ExomiR-206) and 2 down-regulated ExomiR (ExomiR-21-3p and ExomiR-199a-5). DISCUSSION: The results revealed that serum ExomiRs might become a new research direction and breakthrough for the diagnosis and pathophysiological treatment of patients with TBI. Frontiers Media S.A. 2023-04-18 /pmc/articles/PMC10151740/ /pubmed/37144089 http://dx.doi.org/10.3389/fnins.2023.1145307 Text en Copyright © 2023 Huang, Xu, Wang, Wang, Yang, Yao, Bai, Pei, Bai and Li. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Huang, Xintao
Xu, Xinjuan
Wang, Ce
Wang, Yi
Yang, Yajun
Yao, Tianle
Bai, Rui
Pei, Xile
Bai, Feirong
Li, Panpan
Using bioinformatics technology to mine the expression of serum exosomal miRNA in patients with traumatic brain injury
title Using bioinformatics technology to mine the expression of serum exosomal miRNA in patients with traumatic brain injury
title_full Using bioinformatics technology to mine the expression of serum exosomal miRNA in patients with traumatic brain injury
title_fullStr Using bioinformatics technology to mine the expression of serum exosomal miRNA in patients with traumatic brain injury
title_full_unstemmed Using bioinformatics technology to mine the expression of serum exosomal miRNA in patients with traumatic brain injury
title_short Using bioinformatics technology to mine the expression of serum exosomal miRNA in patients with traumatic brain injury
title_sort using bioinformatics technology to mine the expression of serum exosomal mirna in patients with traumatic brain injury
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10151740/
https://www.ncbi.nlm.nih.gov/pubmed/37144089
http://dx.doi.org/10.3389/fnins.2023.1145307
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