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A novel approach for automatic segmentation of prostate and its lesion regions on magnetic resonance imaging
OBJECTIVE: To develop an accurate and automatic segmentation model based on convolution neural network to segment the prostate and its lesion regions. METHODS: Of all 180 subjects, 122 healthy individuals and 58 patients with prostate cancer were included. For each subject, all slices of the prostat...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10154598/ https://www.ncbi.nlm.nih.gov/pubmed/37152013 http://dx.doi.org/10.3389/fonc.2023.1095353 |
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author | Ren, Huipeng Ren, Chengjuan Guo, Ziyu Zhang, Guangnan Luo, Xiaohui Ren, Zhuanqin Tian, Hongzhe Li, Wei Yuan, Hao Hao, Lele Wang, Jiacheng Zhang, Ming |
author_facet | Ren, Huipeng Ren, Chengjuan Guo, Ziyu Zhang, Guangnan Luo, Xiaohui Ren, Zhuanqin Tian, Hongzhe Li, Wei Yuan, Hao Hao, Lele Wang, Jiacheng Zhang, Ming |
author_sort | Ren, Huipeng |
collection | PubMed |
description | OBJECTIVE: To develop an accurate and automatic segmentation model based on convolution neural network to segment the prostate and its lesion regions. METHODS: Of all 180 subjects, 122 healthy individuals and 58 patients with prostate cancer were included. For each subject, all slices of the prostate were comprised in the DWIs. A novel DCNN is proposed to automatically segment the prostate and its lesion regions. This model is inspired by the U-Net model with the encoding-decoding path as the backbone, importing dense block, attention mechanism techniques, and group norm-Atrous Spatial Pyramidal Pooling. Data augmentation was used to avoid overfitting in training. In the experimental phase, the data set was randomly divided into a training (70%), testing set (30%). four-fold cross-validation methods were used to obtain results for each metric. RESULTS: The proposed model achieved in terms of Iou, Dice score, accuracy, sensitivity, 95% Hausdorff Distance, 86.82%,93.90%, 94.11%, 93.8%,7.84 for the prostate, 79.2%, 89.51%, 88.43%,89.31%,8.39 for lesion region in segmentation. Compared to the state-of-the-art models, FCN, U-Net, U-Net++, and ResU-Net, the segmentation model achieved more promising results. CONCLUSION: The proposed model yielded excellent performance in accurate and automatic segmentation of the prostate and lesion regions, revealing that the novel deep convolutional neural network could be used in clinical disease treatment and diagnosis. |
format | Online Article Text |
id | pubmed-10154598 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-101545982023-05-04 A novel approach for automatic segmentation of prostate and its lesion regions on magnetic resonance imaging Ren, Huipeng Ren, Chengjuan Guo, Ziyu Zhang, Guangnan Luo, Xiaohui Ren, Zhuanqin Tian, Hongzhe Li, Wei Yuan, Hao Hao, Lele Wang, Jiacheng Zhang, Ming Front Oncol Oncology OBJECTIVE: To develop an accurate and automatic segmentation model based on convolution neural network to segment the prostate and its lesion regions. METHODS: Of all 180 subjects, 122 healthy individuals and 58 patients with prostate cancer were included. For each subject, all slices of the prostate were comprised in the DWIs. A novel DCNN is proposed to automatically segment the prostate and its lesion regions. This model is inspired by the U-Net model with the encoding-decoding path as the backbone, importing dense block, attention mechanism techniques, and group norm-Atrous Spatial Pyramidal Pooling. Data augmentation was used to avoid overfitting in training. In the experimental phase, the data set was randomly divided into a training (70%), testing set (30%). four-fold cross-validation methods were used to obtain results for each metric. RESULTS: The proposed model achieved in terms of Iou, Dice score, accuracy, sensitivity, 95% Hausdorff Distance, 86.82%,93.90%, 94.11%, 93.8%,7.84 for the prostate, 79.2%, 89.51%, 88.43%,89.31%,8.39 for lesion region in segmentation. Compared to the state-of-the-art models, FCN, U-Net, U-Net++, and ResU-Net, the segmentation model achieved more promising results. CONCLUSION: The proposed model yielded excellent performance in accurate and automatic segmentation of the prostate and lesion regions, revealing that the novel deep convolutional neural network could be used in clinical disease treatment and diagnosis. Frontiers Media S.A. 2023-04-19 /pmc/articles/PMC10154598/ /pubmed/37152013 http://dx.doi.org/10.3389/fonc.2023.1095353 Text en Copyright © 2023 Ren, Ren, Guo, Zhang, Luo, Ren, Tian, Li, Yuan, Hao, Wang and Zhang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Ren, Huipeng Ren, Chengjuan Guo, Ziyu Zhang, Guangnan Luo, Xiaohui Ren, Zhuanqin Tian, Hongzhe Li, Wei Yuan, Hao Hao, Lele Wang, Jiacheng Zhang, Ming A novel approach for automatic segmentation of prostate and its lesion regions on magnetic resonance imaging |
title | A novel approach for automatic segmentation of prostate and its lesion regions on magnetic resonance imaging |
title_full | A novel approach for automatic segmentation of prostate and its lesion regions on magnetic resonance imaging |
title_fullStr | A novel approach for automatic segmentation of prostate and its lesion regions on magnetic resonance imaging |
title_full_unstemmed | A novel approach for automatic segmentation of prostate and its lesion regions on magnetic resonance imaging |
title_short | A novel approach for automatic segmentation of prostate and its lesion regions on magnetic resonance imaging |
title_sort | novel approach for automatic segmentation of prostate and its lesion regions on magnetic resonance imaging |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10154598/ https://www.ncbi.nlm.nih.gov/pubmed/37152013 http://dx.doi.org/10.3389/fonc.2023.1095353 |
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