Draft genome of a clinical Pseudomonas qingdaonensis isolate from a hospitalized patient at Kenyatta National Hospital, Kenya

The first draft genome of Pseudomonas qingdaonensis, a gram-negative bacteria isolated from hospitalized patients in Kenya, is presented in this study. The genome was assembled using nanopore MinION readings, yielding an assembly of 8,857,650 base pairs made up of 5(five) contigs. The genome sequenc...

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Autores principales: Ogoti, Brian, Gachogo, Racheal, Onyambu, Frank
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000 Research Limited 2022
Materias:
Genome Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10154912/
https://www.ncbi.nlm.nih.gov/pubmed/37151611
http://dx.doi.org/10.12688/f1000research.127935.1
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author Ogoti, Brian
Gachogo, Racheal
Onyambu, Frank
author_facet Ogoti, Brian
Gachogo, Racheal
Onyambu, Frank
author_sort Ogoti, Brian
collection PubMed
description The first draft genome of Pseudomonas qingdaonensis, a gram-negative bacteria isolated from hospitalized patients in Kenya, is presented in this study. The genome was assembled using nanopore MinION readings, yielding an assembly of 8,857,650 base pairs made up of 5(five) contigs. The genome sequence of Pseudomonas qingdaonensis will help researchers better grasp its genetics. Furthermore, the data can be a valuable resource for comparative genomics and future research in this novel species.
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spelling pubmed-101549122023-05-04 Draft genome of a clinical Pseudomonas qingdaonensis isolate from a hospitalized patient at Kenyatta National Hospital, Kenya Ogoti, Brian Gachogo, Racheal Onyambu, Frank F1000Res Genome Note The first draft genome of Pseudomonas qingdaonensis, a gram-negative bacteria isolated from hospitalized patients in Kenya, is presented in this study. The genome was assembled using nanopore MinION readings, yielding an assembly of 8,857,650 base pairs made up of 5(five) contigs. The genome sequence of Pseudomonas qingdaonensis will help researchers better grasp its genetics. Furthermore, the data can be a valuable resource for comparative genomics and future research in this novel species. F1000 Research Limited 2022-12-21 /pmc/articles/PMC10154912/ /pubmed/37151611 http://dx.doi.org/10.12688/f1000research.127935.1 Text en Copyright: © 2022 Ogoti B et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Genome Note
Ogoti, Brian
Gachogo, Racheal
Onyambu, Frank
Draft genome of a clinical Pseudomonas qingdaonensis isolate from a hospitalized patient at Kenyatta National Hospital, Kenya
title Draft genome of a clinical Pseudomonas qingdaonensis isolate from a hospitalized patient at Kenyatta National Hospital, Kenya
title_full Draft genome of a clinical Pseudomonas qingdaonensis isolate from a hospitalized patient at Kenyatta National Hospital, Kenya
title_fullStr Draft genome of a clinical Pseudomonas qingdaonensis isolate from a hospitalized patient at Kenyatta National Hospital, Kenya
title_full_unstemmed Draft genome of a clinical Pseudomonas qingdaonensis isolate from a hospitalized patient at Kenyatta National Hospital, Kenya
title_short Draft genome of a clinical Pseudomonas qingdaonensis isolate from a hospitalized patient at Kenyatta National Hospital, Kenya
title_sort draft genome of a clinical pseudomonas qingdaonensis isolate from a hospitalized patient at kenyatta national hospital, kenya
topic Genome Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10154912/
https://www.ncbi.nlm.nih.gov/pubmed/37151611
http://dx.doi.org/10.12688/f1000research.127935.1
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