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neuroAIx-Framework: design of future neuroscience simulation systems exhibiting execution of the cortical microcircuit model 20× faster than biological real-time

INTRODUCTION: Research in the field of computational neuroscience relies on highly capable simulation platforms. With real-time capabilities surpassed for established models like the cortical microcircuit, it is time to conceive next-generation systems: neuroscience simulators providing significant...

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Autores principales: Kauth, Kevin, Stadtmann, Tim, Sobhani, Vida, Gemmeke, Tobias
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10156974/
https://www.ncbi.nlm.nih.gov/pubmed/37152299
http://dx.doi.org/10.3389/fncom.2023.1144143
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author Kauth, Kevin
Stadtmann, Tim
Sobhani, Vida
Gemmeke, Tobias
author_facet Kauth, Kevin
Stadtmann, Tim
Sobhani, Vida
Gemmeke, Tobias
author_sort Kauth, Kevin
collection PubMed
description INTRODUCTION: Research in the field of computational neuroscience relies on highly capable simulation platforms. With real-time capabilities surpassed for established models like the cortical microcircuit, it is time to conceive next-generation systems: neuroscience simulators providing significant acceleration, even for larger networks with natural density, biologically plausible multi-compartment models and the modeling of long-term and structural plasticity. METHODS: Stressing the need for agility to adapt to new concepts or findings in the domain of neuroscience, we have developed the neuroAIx-Framework consisting of an empirical modeling tool, a virtual prototype, and a cluster of FPGA boards. This framework is designed to support and accelerate the continuous development of such platforms driven by new insights in neuroscience. RESULTS: Based on design space explorations using this framework, we devised and realized an FPGA cluster consisting of 35 NetFPGA SUME boards. DISCUSSION: This system functions as an evaluation platform for our framework. At the same time, it resulted in a fully deterministic neuroscience simulation system surpassing the state of the art in both performance and energy efficiency. It is capable of simulating the microcircuit with 20× acceleration compared to biological real-time and achieves an energy efficiency of 48nJ per synaptic event.
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spelling pubmed-101569742023-05-05 neuroAIx-Framework: design of future neuroscience simulation systems exhibiting execution of the cortical microcircuit model 20× faster than biological real-time Kauth, Kevin Stadtmann, Tim Sobhani, Vida Gemmeke, Tobias Front Comput Neurosci Neuroscience INTRODUCTION: Research in the field of computational neuroscience relies on highly capable simulation platforms. With real-time capabilities surpassed for established models like the cortical microcircuit, it is time to conceive next-generation systems: neuroscience simulators providing significant acceleration, even for larger networks with natural density, biologically plausible multi-compartment models and the modeling of long-term and structural plasticity. METHODS: Stressing the need for agility to adapt to new concepts or findings in the domain of neuroscience, we have developed the neuroAIx-Framework consisting of an empirical modeling tool, a virtual prototype, and a cluster of FPGA boards. This framework is designed to support and accelerate the continuous development of such platforms driven by new insights in neuroscience. RESULTS: Based on design space explorations using this framework, we devised and realized an FPGA cluster consisting of 35 NetFPGA SUME boards. DISCUSSION: This system functions as an evaluation platform for our framework. At the same time, it resulted in a fully deterministic neuroscience simulation system surpassing the state of the art in both performance and energy efficiency. It is capable of simulating the microcircuit with 20× acceleration compared to biological real-time and achieves an energy efficiency of 48nJ per synaptic event. Frontiers Media S.A. 2023-04-20 /pmc/articles/PMC10156974/ /pubmed/37152299 http://dx.doi.org/10.3389/fncom.2023.1144143 Text en Copyright © 2023 Kauth, Stadtmann, Sobhani and Gemmeke. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Kauth, Kevin
Stadtmann, Tim
Sobhani, Vida
Gemmeke, Tobias
neuroAIx-Framework: design of future neuroscience simulation systems exhibiting execution of the cortical microcircuit model 20× faster than biological real-time
title neuroAIx-Framework: design of future neuroscience simulation systems exhibiting execution of the cortical microcircuit model 20× faster than biological real-time
title_full neuroAIx-Framework: design of future neuroscience simulation systems exhibiting execution of the cortical microcircuit model 20× faster than biological real-time
title_fullStr neuroAIx-Framework: design of future neuroscience simulation systems exhibiting execution of the cortical microcircuit model 20× faster than biological real-time
title_full_unstemmed neuroAIx-Framework: design of future neuroscience simulation systems exhibiting execution of the cortical microcircuit model 20× faster than biological real-time
title_short neuroAIx-Framework: design of future neuroscience simulation systems exhibiting execution of the cortical microcircuit model 20× faster than biological real-time
title_sort neuroaix-framework: design of future neuroscience simulation systems exhibiting execution of the cortical microcircuit model 20× faster than biological real-time
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10156974/
https://www.ncbi.nlm.nih.gov/pubmed/37152299
http://dx.doi.org/10.3389/fncom.2023.1144143
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