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Machine Learning Algorithms for the Prediction of Locomotor Activity by an Infrared Motion Detector on the Sleep-wake States in Mice
OBJECTIVE: Even though studies using machine learning on sleep-wake states have been performed, studies in various conditions are still necessary. This study aimed to examine the performance of the prediction model of locomotor activities on sleep-wake states using machine learning algorithms. METHO...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korean College of Neuropsychopharmacology
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10157008/ https://www.ncbi.nlm.nih.gov/pubmed/37119220 http://dx.doi.org/10.9758/cpn.2023.21.2.279 |
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author | Hong, Yoo Rha Kim, Kyungwon Moon, Eunsoo Park, Jeonghyun Oh, Chi Eun Lee, Jung Hyun Yoon, Min |
author_facet | Hong, Yoo Rha Kim, Kyungwon Moon, Eunsoo Park, Jeonghyun Oh, Chi Eun Lee, Jung Hyun Yoon, Min |
author_sort | Hong, Yoo Rha |
collection | PubMed |
description | OBJECTIVE: Even though studies using machine learning on sleep-wake states have been performed, studies in various conditions are still necessary. This study aimed to examine the performance of the prediction model of locomotor activities on sleep-wake states using machine learning algorithms. METHODS: The processed data using moving average of locomotor activities were used as predicting features. The sleep-wake states were used as true labels. The prediction models were established by machine learning classifiers such as support vector machine with radial basis function (SVM-RBF), linear discriminant analysis (LDA), naïve Bayes, and random forest (RF). The prediction model was evaluated by a six-fold cross validation. RESULTS: The SVM-RBF and RF showed acceptable performance within a window of moving average from 480 to 1,200 seconds. The highest accuracy (0.869) was shown by the RF at the interval of 480 seconds. Meanwhile, the highest area under the curve (0.939) was shown by LDA at the interval of 870 seconds. CONCLUSION: This study suggested that the prediction model on sleep-wake state using machine learning could show an improvement of the model performance when using moving average with raw data. The prediction model using locomotor activity can be useful in research on sleep-wake state. |
format | Online Article Text |
id | pubmed-10157008 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Korean College of Neuropsychopharmacology |
record_format | MEDLINE/PubMed |
spelling | pubmed-101570082023-05-30 Machine Learning Algorithms for the Prediction of Locomotor Activity by an Infrared Motion Detector on the Sleep-wake States in Mice Hong, Yoo Rha Kim, Kyungwon Moon, Eunsoo Park, Jeonghyun Oh, Chi Eun Lee, Jung Hyun Yoon, Min Clin Psychopharmacol Neurosci Original Article OBJECTIVE: Even though studies using machine learning on sleep-wake states have been performed, studies in various conditions are still necessary. This study aimed to examine the performance of the prediction model of locomotor activities on sleep-wake states using machine learning algorithms. METHODS: The processed data using moving average of locomotor activities were used as predicting features. The sleep-wake states were used as true labels. The prediction models were established by machine learning classifiers such as support vector machine with radial basis function (SVM-RBF), linear discriminant analysis (LDA), naïve Bayes, and random forest (RF). The prediction model was evaluated by a six-fold cross validation. RESULTS: The SVM-RBF and RF showed acceptable performance within a window of moving average from 480 to 1,200 seconds. The highest accuracy (0.869) was shown by the RF at the interval of 480 seconds. Meanwhile, the highest area under the curve (0.939) was shown by LDA at the interval of 870 seconds. CONCLUSION: This study suggested that the prediction model on sleep-wake state using machine learning could show an improvement of the model performance when using moving average with raw data. The prediction model using locomotor activity can be useful in research on sleep-wake state. Korean College of Neuropsychopharmacology 2023-05-30 2023-05-30 /pmc/articles/PMC10157008/ /pubmed/37119220 http://dx.doi.org/10.9758/cpn.2023.21.2.279 Text en Copyright© 2023, Korean College of Neuropsychopharmacology https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0 (https://creativecommons.org/licenses/by-nc/4.0/) ) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Hong, Yoo Rha Kim, Kyungwon Moon, Eunsoo Park, Jeonghyun Oh, Chi Eun Lee, Jung Hyun Yoon, Min Machine Learning Algorithms for the Prediction of Locomotor Activity by an Infrared Motion Detector on the Sleep-wake States in Mice |
title | Machine Learning Algorithms for the Prediction of Locomotor Activity by an Infrared Motion Detector on the Sleep-wake States in Mice |
title_full | Machine Learning Algorithms for the Prediction of Locomotor Activity by an Infrared Motion Detector on the Sleep-wake States in Mice |
title_fullStr | Machine Learning Algorithms for the Prediction of Locomotor Activity by an Infrared Motion Detector on the Sleep-wake States in Mice |
title_full_unstemmed | Machine Learning Algorithms for the Prediction of Locomotor Activity by an Infrared Motion Detector on the Sleep-wake States in Mice |
title_short | Machine Learning Algorithms for the Prediction of Locomotor Activity by an Infrared Motion Detector on the Sleep-wake States in Mice |
title_sort | machine learning algorithms for the prediction of locomotor activity by an infrared motion detector on the sleep-wake states in mice |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10157008/ https://www.ncbi.nlm.nih.gov/pubmed/37119220 http://dx.doi.org/10.9758/cpn.2023.21.2.279 |
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