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Machine Learning Algorithms for the Prediction of Locomotor Activity by an Infrared Motion Detector on the Sleep-wake States in Mice

OBJECTIVE: Even though studies using machine learning on sleep-wake states have been performed, studies in various conditions are still necessary. This study aimed to examine the performance of the prediction model of locomotor activities on sleep-wake states using machine learning algorithms. METHO...

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Autores principales: Hong, Yoo Rha, Kim, Kyungwon, Moon, Eunsoo, Park, Jeonghyun, Oh, Chi Eun, Lee, Jung Hyun, Yoon, Min
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean College of Neuropsychopharmacology 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10157008/
https://www.ncbi.nlm.nih.gov/pubmed/37119220
http://dx.doi.org/10.9758/cpn.2023.21.2.279
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author Hong, Yoo Rha
Kim, Kyungwon
Moon, Eunsoo
Park, Jeonghyun
Oh, Chi Eun
Lee, Jung Hyun
Yoon, Min
author_facet Hong, Yoo Rha
Kim, Kyungwon
Moon, Eunsoo
Park, Jeonghyun
Oh, Chi Eun
Lee, Jung Hyun
Yoon, Min
author_sort Hong, Yoo Rha
collection PubMed
description OBJECTIVE: Even though studies using machine learning on sleep-wake states have been performed, studies in various conditions are still necessary. This study aimed to examine the performance of the prediction model of locomotor activities on sleep-wake states using machine learning algorithms. METHODS: The processed data using moving average of locomotor activities were used as predicting features. The sleep-wake states were used as true labels. The prediction models were established by machine learning classifiers such as support vector machine with radial basis function (SVM-RBF), linear discriminant analysis (LDA), naïve Bayes, and random forest (RF). The prediction model was evaluated by a six-fold cross validation. RESULTS: The SVM-RBF and RF showed acceptable performance within a window of moving average from 480 to 1,200 seconds. The highest accuracy (0.869) was shown by the RF at the interval of 480 seconds. Meanwhile, the highest area under the curve (0.939) was shown by LDA at the interval of 870 seconds. CONCLUSION: This study suggested that the prediction model on sleep-wake state using machine learning could show an improvement of the model performance when using moving average with raw data. The prediction model using locomotor activity can be useful in research on sleep-wake state.
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spelling pubmed-101570082023-05-30 Machine Learning Algorithms for the Prediction of Locomotor Activity by an Infrared Motion Detector on the Sleep-wake States in Mice Hong, Yoo Rha Kim, Kyungwon Moon, Eunsoo Park, Jeonghyun Oh, Chi Eun Lee, Jung Hyun Yoon, Min Clin Psychopharmacol Neurosci Original Article OBJECTIVE: Even though studies using machine learning on sleep-wake states have been performed, studies in various conditions are still necessary. This study aimed to examine the performance of the prediction model of locomotor activities on sleep-wake states using machine learning algorithms. METHODS: The processed data using moving average of locomotor activities were used as predicting features. The sleep-wake states were used as true labels. The prediction models were established by machine learning classifiers such as support vector machine with radial basis function (SVM-RBF), linear discriminant analysis (LDA), naïve Bayes, and random forest (RF). The prediction model was evaluated by a six-fold cross validation. RESULTS: The SVM-RBF and RF showed acceptable performance within a window of moving average from 480 to 1,200 seconds. The highest accuracy (0.869) was shown by the RF at the interval of 480 seconds. Meanwhile, the highest area under the curve (0.939) was shown by LDA at the interval of 870 seconds. CONCLUSION: This study suggested that the prediction model on sleep-wake state using machine learning could show an improvement of the model performance when using moving average with raw data. The prediction model using locomotor activity can be useful in research on sleep-wake state. Korean College of Neuropsychopharmacology 2023-05-30 2023-05-30 /pmc/articles/PMC10157008/ /pubmed/37119220 http://dx.doi.org/10.9758/cpn.2023.21.2.279 Text en Copyright© 2023, Korean College of Neuropsychopharmacology https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0 (https://creativecommons.org/licenses/by-nc/4.0/) ) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Hong, Yoo Rha
Kim, Kyungwon
Moon, Eunsoo
Park, Jeonghyun
Oh, Chi Eun
Lee, Jung Hyun
Yoon, Min
Machine Learning Algorithms for the Prediction of Locomotor Activity by an Infrared Motion Detector on the Sleep-wake States in Mice
title Machine Learning Algorithms for the Prediction of Locomotor Activity by an Infrared Motion Detector on the Sleep-wake States in Mice
title_full Machine Learning Algorithms for the Prediction of Locomotor Activity by an Infrared Motion Detector on the Sleep-wake States in Mice
title_fullStr Machine Learning Algorithms for the Prediction of Locomotor Activity by an Infrared Motion Detector on the Sleep-wake States in Mice
title_full_unstemmed Machine Learning Algorithms for the Prediction of Locomotor Activity by an Infrared Motion Detector on the Sleep-wake States in Mice
title_short Machine Learning Algorithms for the Prediction of Locomotor Activity by an Infrared Motion Detector on the Sleep-wake States in Mice
title_sort machine learning algorithms for the prediction of locomotor activity by an infrared motion detector on the sleep-wake states in mice
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10157008/
https://www.ncbi.nlm.nih.gov/pubmed/37119220
http://dx.doi.org/10.9758/cpn.2023.21.2.279
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