Cargando…

Identification of fungus-growing termite-associated halogenated-PKS maduralactomycin a as a potential inhibitor of MurF protein of multidrug-resistant Acinetobacter baumannii

Multidrug-resistant Acinetobacter baumannii infections have become a major public health concern globally. Inhibition of its essential MurF protein has been proposed as a potential target for broad-spectrum drugs. This study aimed to evaluate the potential of a novel ecological niche of 374 fungus-g...

Descripción completa

Detalles Bibliográficos
Autores principales: Shoaib, Muhammad, Shehzadi, Iram, Asif, Muhammad Umair, Shen, Yulong, Ni, Jinfeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10160657/
https://www.ncbi.nlm.nih.gov/pubmed/37152898
http://dx.doi.org/10.3389/fmolb.2023.1183073
_version_ 1785037328538927104
author Shoaib, Muhammad
Shehzadi, Iram
Asif, Muhammad Umair
Shen, Yulong
Ni, Jinfeng
author_facet Shoaib, Muhammad
Shehzadi, Iram
Asif, Muhammad Umair
Shen, Yulong
Ni, Jinfeng
author_sort Shoaib, Muhammad
collection PubMed
description Multidrug-resistant Acinetobacter baumannii infections have become a major public health concern globally. Inhibition of its essential MurF protein has been proposed as a potential target for broad-spectrum drugs. This study aimed to evaluate the potential of a novel ecological niche of 374 fungus-growing termite associated Natural Products (NPs). The molecular docking and computational pharmacokinetics screened four compounds, i.e., Termstrin B, Fridamycin A, Maduralactomycin A, and Natalenamide C, as potential compounds that have higher binding affinities and favourable protein-ligand interactions. The compound Maduralactomycin A induced more stability based on its lowest average RMSD value (2.31 Å) and low standard deviation (0.35) supported by the consistent flexibility and β-factor during the protein’s time-dependent motion. While hydrogen bond analysis indicated that Termstrin B has formed the strongest intra-protein interaction, solvent accessibility was in good agreement with Maduralactomycin A compactness. Maduralactomycin A has the strongest binding energy among all the compounds (−348.48 kcal/mol) followed by Termstrin B (−321.19 kcal/mol). Since these findings suggest Maduralactomycin A and Termstrin B as promising candidates for inhibition of MurF protein, the favourable binding energies of Maduralactomycin A make it a more important compound to warrant further investigation. However, experimental validation using animal models and clinical trials is recommended before reaching any final conclusions.
format Online
Article
Text
id pubmed-10160657
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-101606572023-05-06 Identification of fungus-growing termite-associated halogenated-PKS maduralactomycin a as a potential inhibitor of MurF protein of multidrug-resistant Acinetobacter baumannii Shoaib, Muhammad Shehzadi, Iram Asif, Muhammad Umair Shen, Yulong Ni, Jinfeng Front Mol Biosci Molecular Biosciences Multidrug-resistant Acinetobacter baumannii infections have become a major public health concern globally. Inhibition of its essential MurF protein has been proposed as a potential target for broad-spectrum drugs. This study aimed to evaluate the potential of a novel ecological niche of 374 fungus-growing termite associated Natural Products (NPs). The molecular docking and computational pharmacokinetics screened four compounds, i.e., Termstrin B, Fridamycin A, Maduralactomycin A, and Natalenamide C, as potential compounds that have higher binding affinities and favourable protein-ligand interactions. The compound Maduralactomycin A induced more stability based on its lowest average RMSD value (2.31 Å) and low standard deviation (0.35) supported by the consistent flexibility and β-factor during the protein’s time-dependent motion. While hydrogen bond analysis indicated that Termstrin B has formed the strongest intra-protein interaction, solvent accessibility was in good agreement with Maduralactomycin A compactness. Maduralactomycin A has the strongest binding energy among all the compounds (−348.48 kcal/mol) followed by Termstrin B (−321.19 kcal/mol). Since these findings suggest Maduralactomycin A and Termstrin B as promising candidates for inhibition of MurF protein, the favourable binding energies of Maduralactomycin A make it a more important compound to warrant further investigation. However, experimental validation using animal models and clinical trials is recommended before reaching any final conclusions. Frontiers Media S.A. 2023-04-21 /pmc/articles/PMC10160657/ /pubmed/37152898 http://dx.doi.org/10.3389/fmolb.2023.1183073 Text en Copyright © 2023 Shoaib, Shehzadi, Asif, Shen and Ni. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Molecular Biosciences
Shoaib, Muhammad
Shehzadi, Iram
Asif, Muhammad Umair
Shen, Yulong
Ni, Jinfeng
Identification of fungus-growing termite-associated halogenated-PKS maduralactomycin a as a potential inhibitor of MurF protein of multidrug-resistant Acinetobacter baumannii
title Identification of fungus-growing termite-associated halogenated-PKS maduralactomycin a as a potential inhibitor of MurF protein of multidrug-resistant Acinetobacter baumannii
title_full Identification of fungus-growing termite-associated halogenated-PKS maduralactomycin a as a potential inhibitor of MurF protein of multidrug-resistant Acinetobacter baumannii
title_fullStr Identification of fungus-growing termite-associated halogenated-PKS maduralactomycin a as a potential inhibitor of MurF protein of multidrug-resistant Acinetobacter baumannii
title_full_unstemmed Identification of fungus-growing termite-associated halogenated-PKS maduralactomycin a as a potential inhibitor of MurF protein of multidrug-resistant Acinetobacter baumannii
title_short Identification of fungus-growing termite-associated halogenated-PKS maduralactomycin a as a potential inhibitor of MurF protein of multidrug-resistant Acinetobacter baumannii
title_sort identification of fungus-growing termite-associated halogenated-pks maduralactomycin a as a potential inhibitor of murf protein of multidrug-resistant acinetobacter baumannii
topic Molecular Biosciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10160657/
https://www.ncbi.nlm.nih.gov/pubmed/37152898
http://dx.doi.org/10.3389/fmolb.2023.1183073
work_keys_str_mv AT shoaibmuhammad identificationoffungusgrowingtermiteassociatedhalogenatedpksmaduralactomycinaasapotentialinhibitorofmurfproteinofmultidrugresistantacinetobacterbaumannii
AT shehzadiiram identificationoffungusgrowingtermiteassociatedhalogenatedpksmaduralactomycinaasapotentialinhibitorofmurfproteinofmultidrugresistantacinetobacterbaumannii
AT asifmuhammadumair identificationoffungusgrowingtermiteassociatedhalogenatedpksmaduralactomycinaasapotentialinhibitorofmurfproteinofmultidrugresistantacinetobacterbaumannii
AT shenyulong identificationoffungusgrowingtermiteassociatedhalogenatedpksmaduralactomycinaasapotentialinhibitorofmurfproteinofmultidrugresistantacinetobacterbaumannii
AT nijinfeng identificationoffungusgrowingtermiteassociatedhalogenatedpksmaduralactomycinaasapotentialinhibitorofmurfproteinofmultidrugresistantacinetobacterbaumannii