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Use of Correct and Incorrect Methods of Accounting for Age in Studies of Epigenetic Accelerated Aging: Implications and Recommendations for Best Practices
Motivated by our conduct of a literature review on social exposures and accelerated aging as measured by a growing number of epigenetic “clocks” (which estimate age via DNA methylation (DNAm) patterns), we report on 3 different approaches in the epidemiologic literature—1 incorrect and 2 correct—on...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10160768/ https://www.ncbi.nlm.nih.gov/pubmed/36721372 http://dx.doi.org/10.1093/aje/kwad025 |
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author | Krieger, Nancy Chen, Jarvis T Testa, Christian Diez Roux, Ana Tilling, Kate Watkins, Sarah Simpkin, Andrew J Suderman, Matthew Davey Smith, George De Vivo, Immaculata Waterman, Pamela D Relton, Caroline |
author_facet | Krieger, Nancy Chen, Jarvis T Testa, Christian Diez Roux, Ana Tilling, Kate Watkins, Sarah Simpkin, Andrew J Suderman, Matthew Davey Smith, George De Vivo, Immaculata Waterman, Pamela D Relton, Caroline |
author_sort | Krieger, Nancy |
collection | PubMed |
description | Motivated by our conduct of a literature review on social exposures and accelerated aging as measured by a growing number of epigenetic “clocks” (which estimate age via DNA methylation (DNAm) patterns), we report on 3 different approaches in the epidemiologic literature—1 incorrect and 2 correct—on the treatment of age in these and other studies using other common exposures (i.e., body mass index and alcohol consumption). Among the 50 empirical articles reviewed, the majority (n = 29; 58%) used the incorrect method of analyzing accelerated aging detrended for age as the outcome and did not control for age as a covariate. By contrast, only 42% used correct methods, which are either to analyze accelerated aging detrended for age as the outcome and control for age as a covariate (n = 16; 32%) or to analyze raw DNAm age as the outcome and control for age as a covariate (n = 5; 10%). In accord with prior demonstrations of bias introduced by use of the incorrect approach, we provide simulation analyses and additional empirical analyses to illustrate how the incorrect method can lead to bias towards the null, and we discuss implications for extant research and recommendations for best practices. |
format | Online Article Text |
id | pubmed-10160768 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-101607682023-05-06 Use of Correct and Incorrect Methods of Accounting for Age in Studies of Epigenetic Accelerated Aging: Implications and Recommendations for Best Practices Krieger, Nancy Chen, Jarvis T Testa, Christian Diez Roux, Ana Tilling, Kate Watkins, Sarah Simpkin, Andrew J Suderman, Matthew Davey Smith, George De Vivo, Immaculata Waterman, Pamela D Relton, Caroline Am J Epidemiol Practice of Epidemiology Motivated by our conduct of a literature review on social exposures and accelerated aging as measured by a growing number of epigenetic “clocks” (which estimate age via DNA methylation (DNAm) patterns), we report on 3 different approaches in the epidemiologic literature—1 incorrect and 2 correct—on the treatment of age in these and other studies using other common exposures (i.e., body mass index and alcohol consumption). Among the 50 empirical articles reviewed, the majority (n = 29; 58%) used the incorrect method of analyzing accelerated aging detrended for age as the outcome and did not control for age as a covariate. By contrast, only 42% used correct methods, which are either to analyze accelerated aging detrended for age as the outcome and control for age as a covariate (n = 16; 32%) or to analyze raw DNAm age as the outcome and control for age as a covariate (n = 5; 10%). In accord with prior demonstrations of bias introduced by use of the incorrect approach, we provide simulation analyses and additional empirical analyses to illustrate how the incorrect method can lead to bias towards the null, and we discuss implications for extant research and recommendations for best practices. Oxford University Press 2023-01-30 /pmc/articles/PMC10160768/ /pubmed/36721372 http://dx.doi.org/10.1093/aje/kwad025 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of the Johns Hopkins Bloomberg School of Public Health. This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journalpermissions@oup.com. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Practice of Epidemiology Krieger, Nancy Chen, Jarvis T Testa, Christian Diez Roux, Ana Tilling, Kate Watkins, Sarah Simpkin, Andrew J Suderman, Matthew Davey Smith, George De Vivo, Immaculata Waterman, Pamela D Relton, Caroline Use of Correct and Incorrect Methods of Accounting for Age in Studies of Epigenetic Accelerated Aging: Implications and Recommendations for Best Practices |
title | Use of Correct and Incorrect Methods of Accounting for Age in Studies of Epigenetic Accelerated Aging: Implications and Recommendations for Best Practices |
title_full | Use of Correct and Incorrect Methods of Accounting for Age in Studies of Epigenetic Accelerated Aging: Implications and Recommendations for Best Practices |
title_fullStr | Use of Correct and Incorrect Methods of Accounting for Age in Studies of Epigenetic Accelerated Aging: Implications and Recommendations for Best Practices |
title_full_unstemmed | Use of Correct and Incorrect Methods of Accounting for Age in Studies of Epigenetic Accelerated Aging: Implications and Recommendations for Best Practices |
title_short | Use of Correct and Incorrect Methods of Accounting for Age in Studies of Epigenetic Accelerated Aging: Implications and Recommendations for Best Practices |
title_sort | use of correct and incorrect methods of accounting for age in studies of epigenetic accelerated aging: implications and recommendations for best practices |
topic | Practice of Epidemiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10160768/ https://www.ncbi.nlm.nih.gov/pubmed/36721372 http://dx.doi.org/10.1093/aje/kwad025 |
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