Cargando…

Use of Correct and Incorrect Methods of Accounting for Age in Studies of Epigenetic Accelerated Aging: Implications and Recommendations for Best Practices

Motivated by our conduct of a literature review on social exposures and accelerated aging as measured by a growing number of epigenetic “clocks” (which estimate age via DNA methylation (DNAm) patterns), we report on 3 different approaches in the epidemiologic literature—1 incorrect and 2 correct—on...

Descripción completa

Detalles Bibliográficos
Autores principales: Krieger, Nancy, Chen, Jarvis T, Testa, Christian, Diez Roux, Ana, Tilling, Kate, Watkins, Sarah, Simpkin, Andrew J, Suderman, Matthew, Davey Smith, George, De Vivo, Immaculata, Waterman, Pamela D, Relton, Caroline
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10160768/
https://www.ncbi.nlm.nih.gov/pubmed/36721372
http://dx.doi.org/10.1093/aje/kwad025
_version_ 1785037354291953664
author Krieger, Nancy
Chen, Jarvis T
Testa, Christian
Diez Roux, Ana
Tilling, Kate
Watkins, Sarah
Simpkin, Andrew J
Suderman, Matthew
Davey Smith, George
De Vivo, Immaculata
Waterman, Pamela D
Relton, Caroline
author_facet Krieger, Nancy
Chen, Jarvis T
Testa, Christian
Diez Roux, Ana
Tilling, Kate
Watkins, Sarah
Simpkin, Andrew J
Suderman, Matthew
Davey Smith, George
De Vivo, Immaculata
Waterman, Pamela D
Relton, Caroline
author_sort Krieger, Nancy
collection PubMed
description Motivated by our conduct of a literature review on social exposures and accelerated aging as measured by a growing number of epigenetic “clocks” (which estimate age via DNA methylation (DNAm) patterns), we report on 3 different approaches in the epidemiologic literature—1 incorrect and 2 correct—on the treatment of age in these and other studies using other common exposures (i.e., body mass index and alcohol consumption). Among the 50 empirical articles reviewed, the majority (n = 29; 58%) used the incorrect method of analyzing accelerated aging detrended for age as the outcome and did not control for age as a covariate. By contrast, only 42% used correct methods, which are either to analyze accelerated aging detrended for age as the outcome and control for age as a covariate (n = 16; 32%) or to analyze raw DNAm age as the outcome and control for age as a covariate (n = 5; 10%). In accord with prior demonstrations of bias introduced by use of the incorrect approach, we provide simulation analyses and additional empirical analyses to illustrate how the incorrect method can lead to bias towards the null, and we discuss implications for extant research and recommendations for best practices.
format Online
Article
Text
id pubmed-10160768
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-101607682023-05-06 Use of Correct and Incorrect Methods of Accounting for Age in Studies of Epigenetic Accelerated Aging: Implications and Recommendations for Best Practices Krieger, Nancy Chen, Jarvis T Testa, Christian Diez Roux, Ana Tilling, Kate Watkins, Sarah Simpkin, Andrew J Suderman, Matthew Davey Smith, George De Vivo, Immaculata Waterman, Pamela D Relton, Caroline Am J Epidemiol Practice of Epidemiology Motivated by our conduct of a literature review on social exposures and accelerated aging as measured by a growing number of epigenetic “clocks” (which estimate age via DNA methylation (DNAm) patterns), we report on 3 different approaches in the epidemiologic literature—1 incorrect and 2 correct—on the treatment of age in these and other studies using other common exposures (i.e., body mass index and alcohol consumption). Among the 50 empirical articles reviewed, the majority (n = 29; 58%) used the incorrect method of analyzing accelerated aging detrended for age as the outcome and did not control for age as a covariate. By contrast, only 42% used correct methods, which are either to analyze accelerated aging detrended for age as the outcome and control for age as a covariate (n = 16; 32%) or to analyze raw DNAm age as the outcome and control for age as a covariate (n = 5; 10%). In accord with prior demonstrations of bias introduced by use of the incorrect approach, we provide simulation analyses and additional empirical analyses to illustrate how the incorrect method can lead to bias towards the null, and we discuss implications for extant research and recommendations for best practices. Oxford University Press 2023-01-30 /pmc/articles/PMC10160768/ /pubmed/36721372 http://dx.doi.org/10.1093/aje/kwad025 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of the Johns Hopkins Bloomberg School of Public Health. This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journalpermissions@oup.com. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Practice of Epidemiology
Krieger, Nancy
Chen, Jarvis T
Testa, Christian
Diez Roux, Ana
Tilling, Kate
Watkins, Sarah
Simpkin, Andrew J
Suderman, Matthew
Davey Smith, George
De Vivo, Immaculata
Waterman, Pamela D
Relton, Caroline
Use of Correct and Incorrect Methods of Accounting for Age in Studies of Epigenetic Accelerated Aging: Implications and Recommendations for Best Practices
title Use of Correct and Incorrect Methods of Accounting for Age in Studies of Epigenetic Accelerated Aging: Implications and Recommendations for Best Practices
title_full Use of Correct and Incorrect Methods of Accounting for Age in Studies of Epigenetic Accelerated Aging: Implications and Recommendations for Best Practices
title_fullStr Use of Correct and Incorrect Methods of Accounting for Age in Studies of Epigenetic Accelerated Aging: Implications and Recommendations for Best Practices
title_full_unstemmed Use of Correct and Incorrect Methods of Accounting for Age in Studies of Epigenetic Accelerated Aging: Implications and Recommendations for Best Practices
title_short Use of Correct and Incorrect Methods of Accounting for Age in Studies of Epigenetic Accelerated Aging: Implications and Recommendations for Best Practices
title_sort use of correct and incorrect methods of accounting for age in studies of epigenetic accelerated aging: implications and recommendations for best practices
topic Practice of Epidemiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10160768/
https://www.ncbi.nlm.nih.gov/pubmed/36721372
http://dx.doi.org/10.1093/aje/kwad025
work_keys_str_mv AT kriegernancy useofcorrectandincorrectmethodsofaccountingforageinstudiesofepigeneticacceleratedagingimplicationsandrecommendationsforbestpractices
AT chenjarvist useofcorrectandincorrectmethodsofaccountingforageinstudiesofepigeneticacceleratedagingimplicationsandrecommendationsforbestpractices
AT testachristian useofcorrectandincorrectmethodsofaccountingforageinstudiesofepigeneticacceleratedagingimplicationsandrecommendationsforbestpractices
AT diezrouxana useofcorrectandincorrectmethodsofaccountingforageinstudiesofepigeneticacceleratedagingimplicationsandrecommendationsforbestpractices
AT tillingkate useofcorrectandincorrectmethodsofaccountingforageinstudiesofepigeneticacceleratedagingimplicationsandrecommendationsforbestpractices
AT watkinssarah useofcorrectandincorrectmethodsofaccountingforageinstudiesofepigeneticacceleratedagingimplicationsandrecommendationsforbestpractices
AT simpkinandrewj useofcorrectandincorrectmethodsofaccountingforageinstudiesofepigeneticacceleratedagingimplicationsandrecommendationsforbestpractices
AT sudermanmatthew useofcorrectandincorrectmethodsofaccountingforageinstudiesofepigeneticacceleratedagingimplicationsandrecommendationsforbestpractices
AT daveysmithgeorge useofcorrectandincorrectmethodsofaccountingforageinstudiesofepigeneticacceleratedagingimplicationsandrecommendationsforbestpractices
AT devivoimmaculata useofcorrectandincorrectmethodsofaccountingforageinstudiesofepigeneticacceleratedagingimplicationsandrecommendationsforbestpractices
AT watermanpamelad useofcorrectandincorrectmethodsofaccountingforageinstudiesofepigeneticacceleratedagingimplicationsandrecommendationsforbestpractices
AT reltoncaroline useofcorrectandincorrectmethodsofaccountingforageinstudiesofepigeneticacceleratedagingimplicationsandrecommendationsforbestpractices