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Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering

Advances in time-resolved structural techniques, mainly in macromolecular crystallography and small-angle X-ray scattering (SAXS), allow for a detailed view of the dynamics of biological macromolecules and reactions between binding partners. Of particular promise, are mix-and-inject techniques, whic...

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Autores principales: Zielinski, Kara A., Katz, Andrea M., Calvey, George D., Pabit, Suzette A., Milano, Shawn K., Aplin, Cody, San Emeterio, Josue, Cerione, Richard A., Pollack, Lois
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10161774/
https://www.ncbi.nlm.nih.gov/pubmed/37144817
http://dx.doi.org/10.1107/S2052252523003482
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author Zielinski, Kara A.
Katz, Andrea M.
Calvey, George D.
Pabit, Suzette A.
Milano, Shawn K.
Aplin, Cody
San Emeterio, Josue
Cerione, Richard A.
Pollack, Lois
author_facet Zielinski, Kara A.
Katz, Andrea M.
Calvey, George D.
Pabit, Suzette A.
Milano, Shawn K.
Aplin, Cody
San Emeterio, Josue
Cerione, Richard A.
Pollack, Lois
author_sort Zielinski, Kara A.
collection PubMed
description Advances in time-resolved structural techniques, mainly in macromolecular crystallography and small-angle X-ray scattering (SAXS), allow for a detailed view of the dynamics of biological macromolecules and reactions between binding partners. Of particular promise, are mix-and-inject techniques, which offer a wide range of experimental possibility as microfluidic mixers are used to rapidly combine two species just prior to data collection. Most mix-and-inject approaches rely on diffusive mixers, which have been effectively used within crystallography and SAXS for a variety of systems, but their success is dependent on a specific set of conditions to facilitate fast diffusion for mixing. The use of a new chaotic advection mixer designed for microfluidic applications helps to further broaden the types of systems compatible with time-resolved mixing experiments. The chaotic advection mixer can create ultra-thin, alternating layers of liquid, enabling faster diffusion so that even more slowly diffusing molecules, like proteins or nucleic acids, can achieve fast mixing on timescales relevant to biological reactions. This mixer was first used in UV–vis absorbance and SAXS experiments with systems of a variety of molecular weights, and thus diffusion speeds. Careful effort was also dedicated to making a loop-loading sample-delivery system that consumes as little sample as possible, enabling the study of precious, laboratory-purified samples. The combination of the versatile mixer with low sample consumption opens the door to many new applications for mix-and-inject studies.
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spelling pubmed-101617742023-05-06 Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering Zielinski, Kara A. Katz, Andrea M. Calvey, George D. Pabit, Suzette A. Milano, Shawn K. Aplin, Cody San Emeterio, Josue Cerione, Richard A. Pollack, Lois IUCrJ Research Papers Advances in time-resolved structural techniques, mainly in macromolecular crystallography and small-angle X-ray scattering (SAXS), allow for a detailed view of the dynamics of biological macromolecules and reactions between binding partners. Of particular promise, are mix-and-inject techniques, which offer a wide range of experimental possibility as microfluidic mixers are used to rapidly combine two species just prior to data collection. Most mix-and-inject approaches rely on diffusive mixers, which have been effectively used within crystallography and SAXS for a variety of systems, but their success is dependent on a specific set of conditions to facilitate fast diffusion for mixing. The use of a new chaotic advection mixer designed for microfluidic applications helps to further broaden the types of systems compatible with time-resolved mixing experiments. The chaotic advection mixer can create ultra-thin, alternating layers of liquid, enabling faster diffusion so that even more slowly diffusing molecules, like proteins or nucleic acids, can achieve fast mixing on timescales relevant to biological reactions. This mixer was first used in UV–vis absorbance and SAXS experiments with systems of a variety of molecular weights, and thus diffusion speeds. Careful effort was also dedicated to making a loop-loading sample-delivery system that consumes as little sample as possible, enabling the study of precious, laboratory-purified samples. The combination of the versatile mixer with low sample consumption opens the door to many new applications for mix-and-inject studies. International Union of Crystallography 2023-04-28 /pmc/articles/PMC10161774/ /pubmed/37144817 http://dx.doi.org/10.1107/S2052252523003482 Text en © Kara A. Zielinski et al. 2023 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Zielinski, Kara A.
Katz, Andrea M.
Calvey, George D.
Pabit, Suzette A.
Milano, Shawn K.
Aplin, Cody
San Emeterio, Josue
Cerione, Richard A.
Pollack, Lois
Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering
title Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering
title_full Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering
title_fullStr Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering
title_full_unstemmed Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering
title_short Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering
title_sort chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle x-ray scattering
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10161774/
https://www.ncbi.nlm.nih.gov/pubmed/37144817
http://dx.doi.org/10.1107/S2052252523003482
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