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JINXED: just in time crystallization for easy structure determination of biological macromolecules

Macromolecular crystallography is a well established method in the field of structural biology and has led to the majority of known protein structures to date. After focusing on static structures, the method is now under development towards the investigation of protein dynamics through time-resolved...

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Autores principales: Henkel, Alessandra, Galchenkova, Marina, Maracke, Julia, Yefanov, Oleksandr, Klopprogge, Bjarne, Hakanpää, Johanna, Mesters, Jeroen R., Chapman, Henry N., Oberthuer, Dominik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10161778/
https://www.ncbi.nlm.nih.gov/pubmed/36892542
http://dx.doi.org/10.1107/S2052252523001653
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author Henkel, Alessandra
Galchenkova, Marina
Maracke, Julia
Yefanov, Oleksandr
Klopprogge, Bjarne
Hakanpää, Johanna
Mesters, Jeroen R.
Chapman, Henry N.
Oberthuer, Dominik
author_facet Henkel, Alessandra
Galchenkova, Marina
Maracke, Julia
Yefanov, Oleksandr
Klopprogge, Bjarne
Hakanpää, Johanna
Mesters, Jeroen R.
Chapman, Henry N.
Oberthuer, Dominik
author_sort Henkel, Alessandra
collection PubMed
description Macromolecular crystallography is a well established method in the field of structural biology and has led to the majority of known protein structures to date. After focusing on static structures, the method is now under development towards the investigation of protein dynamics through time-resolved methods. These experiments often require multiple handling steps of the sensitive protein crystals, e.g. for ligand-soaking and cryo-protection. These handling steps can cause significant crystal damage, and hence reduce data quality. Furthermore, in time-resolved experiments based on serial crystallography, which use micrometre-sized crystals for short diffusion times of ligands, certain crystal morphologies with small solvent channels can prevent sufficient ligand diffusion. Described here is a method that combines protein crystallization and data collection in a novel one-step process. Corresponding experiments were successfully performed as a proof-of-principle using hen egg-white lysozyme and crystallization times of only a few seconds. This method, called JINXED (Just IN time Crystallization for Easy structure Determination), promises high-quality data due to the avoidance of crystal handling and has the potential to enable time-resolved experiments with crystals containing small solvent channels by adding potential ligands to the crystallization buffer, simulating traditional co-crystallization approaches.
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spelling pubmed-101617782023-05-06 JINXED: just in time crystallization for easy structure determination of biological macromolecules Henkel, Alessandra Galchenkova, Marina Maracke, Julia Yefanov, Oleksandr Klopprogge, Bjarne Hakanpää, Johanna Mesters, Jeroen R. Chapman, Henry N. Oberthuer, Dominik IUCrJ Research Papers Macromolecular crystallography is a well established method in the field of structural biology and has led to the majority of known protein structures to date. After focusing on static structures, the method is now under development towards the investigation of protein dynamics through time-resolved methods. These experiments often require multiple handling steps of the sensitive protein crystals, e.g. for ligand-soaking and cryo-protection. These handling steps can cause significant crystal damage, and hence reduce data quality. Furthermore, in time-resolved experiments based on serial crystallography, which use micrometre-sized crystals for short diffusion times of ligands, certain crystal morphologies with small solvent channels can prevent sufficient ligand diffusion. Described here is a method that combines protein crystallization and data collection in a novel one-step process. Corresponding experiments were successfully performed as a proof-of-principle using hen egg-white lysozyme and crystallization times of only a few seconds. This method, called JINXED (Just IN time Crystallization for Easy structure Determination), promises high-quality data due to the avoidance of crystal handling and has the potential to enable time-resolved experiments with crystals containing small solvent channels by adding potential ligands to the crystallization buffer, simulating traditional co-crystallization approaches. International Union of Crystallography 2023-03-09 /pmc/articles/PMC10161778/ /pubmed/36892542 http://dx.doi.org/10.1107/S2052252523001653 Text en © Alessandra Henkel et al. 2023 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Henkel, Alessandra
Galchenkova, Marina
Maracke, Julia
Yefanov, Oleksandr
Klopprogge, Bjarne
Hakanpää, Johanna
Mesters, Jeroen R.
Chapman, Henry N.
Oberthuer, Dominik
JINXED: just in time crystallization for easy structure determination of biological macromolecules
title JINXED: just in time crystallization for easy structure determination of biological macromolecules
title_full JINXED: just in time crystallization for easy structure determination of biological macromolecules
title_fullStr JINXED: just in time crystallization for easy structure determination of biological macromolecules
title_full_unstemmed JINXED: just in time crystallization for easy structure determination of biological macromolecules
title_short JINXED: just in time crystallization for easy structure determination of biological macromolecules
title_sort jinxed: just in time crystallization for easy structure determination of biological macromolecules
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10161778/
https://www.ncbi.nlm.nih.gov/pubmed/36892542
http://dx.doi.org/10.1107/S2052252523001653
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