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Remote sensing for field pea yield estimation: A study of multi-scale data fusion approaches in phenomics

INTRODUCTION: Remote sensing using unmanned aerial systems (UAS) are prevalent for phenomics and precision agricultural applications. The high-resolution data for these applications can provide useful spectral characteristics of crops associated with performance traits such as seed yield. With the r...

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Autores principales: Marzougui, Afef, McGee, Rebecca J., Van Vleet, Stephen, Sankaran, Sindhuja
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10161932/
https://www.ncbi.nlm.nih.gov/pubmed/37152173
http://dx.doi.org/10.3389/fpls.2023.1111575
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author Marzougui, Afef
McGee, Rebecca J.
Van Vleet, Stephen
Sankaran, Sindhuja
author_facet Marzougui, Afef
McGee, Rebecca J.
Van Vleet, Stephen
Sankaran, Sindhuja
author_sort Marzougui, Afef
collection PubMed
description INTRODUCTION: Remote sensing using unmanned aerial systems (UAS) are prevalent for phenomics and precision agricultural applications. The high-resolution data for these applications can provide useful spectral characteristics of crops associated with performance traits such as seed yield. With the recent availability of high-resolution satellite imagery, there has been growing interest in using this technology for plot-scale remote sensing applications, particularly those related to breeding programs. This study compared the features extracted from high-resolution satellite and UAS multispectral imagery (visible and near-infrared) to predict the seed yield from two diverse plot-scale field pea yield trials (advanced breeding and variety testing) using the random forest model. METHODS: The multi-modal (spectral and textural features) and multi-scale (satellite and UAS) data fusion approaches were evaluated to improve seed yield prediction accuracy across trials and time points. These approaches included both image fusion, such as pan-sharpening of satellite imagery with UAS imagery using intensity-hue-saturation transformation and additive wavelet luminance proportional approaches, and feature fusion, which involved integrating extracted spectral features. In addition, we also compared the image fusion approach to high-definition satellite data with a resolution of 0.15 m/pixel. The effectiveness of each approach was evaluated with data at both individual and combined time points. RESULTS AND DISCUSSION: The major findings can be summarized as follows: (1) the inclusion of the texture features did not improve the model performance, (2) the performance of the model using spectral features from satellite imagery at its original resolution can provide similar results as UAS imagery, with variation depending on the field pea yield trial under study and the growth stage, (3) the model performance improved after applying multi-scale, multiple time point feature fusion, (4) the features extracted from the pan-sharpened satellite imagery using intensity-hue-saturation transformation (image fusion) showed better model performance than those with original satellite imagery or high definition imagery, and (5) the green normalized difference vegetation index and transformed triangular vegetation index were identified as key features contributing to high model performance across trials and time points. These findings demonstrate the potential of high-resolution satellite imagery and data fusion approaches for plot-scale phenomics applications.
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spelling pubmed-101619322023-05-06 Remote sensing for field pea yield estimation: A study of multi-scale data fusion approaches in phenomics Marzougui, Afef McGee, Rebecca J. Van Vleet, Stephen Sankaran, Sindhuja Front Plant Sci Plant Science INTRODUCTION: Remote sensing using unmanned aerial systems (UAS) are prevalent for phenomics and precision agricultural applications. The high-resolution data for these applications can provide useful spectral characteristics of crops associated with performance traits such as seed yield. With the recent availability of high-resolution satellite imagery, there has been growing interest in using this technology for plot-scale remote sensing applications, particularly those related to breeding programs. This study compared the features extracted from high-resolution satellite and UAS multispectral imagery (visible and near-infrared) to predict the seed yield from two diverse plot-scale field pea yield trials (advanced breeding and variety testing) using the random forest model. METHODS: The multi-modal (spectral and textural features) and multi-scale (satellite and UAS) data fusion approaches were evaluated to improve seed yield prediction accuracy across trials and time points. These approaches included both image fusion, such as pan-sharpening of satellite imagery with UAS imagery using intensity-hue-saturation transformation and additive wavelet luminance proportional approaches, and feature fusion, which involved integrating extracted spectral features. In addition, we also compared the image fusion approach to high-definition satellite data with a resolution of 0.15 m/pixel. The effectiveness of each approach was evaluated with data at both individual and combined time points. RESULTS AND DISCUSSION: The major findings can be summarized as follows: (1) the inclusion of the texture features did not improve the model performance, (2) the performance of the model using spectral features from satellite imagery at its original resolution can provide similar results as UAS imagery, with variation depending on the field pea yield trial under study and the growth stage, (3) the model performance improved after applying multi-scale, multiple time point feature fusion, (4) the features extracted from the pan-sharpened satellite imagery using intensity-hue-saturation transformation (image fusion) showed better model performance than those with original satellite imagery or high definition imagery, and (5) the green normalized difference vegetation index and transformed triangular vegetation index were identified as key features contributing to high model performance across trials and time points. These findings demonstrate the potential of high-resolution satellite imagery and data fusion approaches for plot-scale phenomics applications. Frontiers Media S.A. 2023-03-03 /pmc/articles/PMC10161932/ /pubmed/37152173 http://dx.doi.org/10.3389/fpls.2023.1111575 Text en Copyright © 2023 Marzougui, McGee, Van Vleet and Sankaran https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Marzougui, Afef
McGee, Rebecca J.
Van Vleet, Stephen
Sankaran, Sindhuja
Remote sensing for field pea yield estimation: A study of multi-scale data fusion approaches in phenomics
title Remote sensing for field pea yield estimation: A study of multi-scale data fusion approaches in phenomics
title_full Remote sensing for field pea yield estimation: A study of multi-scale data fusion approaches in phenomics
title_fullStr Remote sensing for field pea yield estimation: A study of multi-scale data fusion approaches in phenomics
title_full_unstemmed Remote sensing for field pea yield estimation: A study of multi-scale data fusion approaches in phenomics
title_short Remote sensing for field pea yield estimation: A study of multi-scale data fusion approaches in phenomics
title_sort remote sensing for field pea yield estimation: a study of multi-scale data fusion approaches in phenomics
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10161932/
https://www.ncbi.nlm.nih.gov/pubmed/37152173
http://dx.doi.org/10.3389/fpls.2023.1111575
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