Cargando…

Evaluating the ability of some natural phenolic acids to target the main protease and AAK1 in SARS COV-2

Researchers are constantly searching for drugs to combat the coronavirus pandemic caused by SARS-CoV-2, which has lasted for over two years. Natural compounds such as phenolic acids are being tested against Mpro and AAK1, which are key players in the SARS-CoV-2 life cycle. This research work aims to...

Descripción completa

Detalles Bibliográficos
Autores principales: Ghamry, Heba I., Belal, Amany, El-Ashrey, Mohamed Kandeel, Tawfik, Haytham O., Alsantali, Reem I., Obaidullah, Ahmad J., El-Mansi, Ahmed A., Abdelrahman, Doaa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10162004/
https://www.ncbi.nlm.nih.gov/pubmed/37147518
http://dx.doi.org/10.1038/s41598-023-34189-6
_version_ 1785037613146570752
author Ghamry, Heba I.
Belal, Amany
El-Ashrey, Mohamed Kandeel
Tawfik, Haytham O.
Alsantali, Reem I.
Obaidullah, Ahmad J.
El-Mansi, Ahmed A.
Abdelrahman, Doaa
author_facet Ghamry, Heba I.
Belal, Amany
El-Ashrey, Mohamed Kandeel
Tawfik, Haytham O.
Alsantali, Reem I.
Obaidullah, Ahmad J.
El-Mansi, Ahmed A.
Abdelrahman, Doaa
author_sort Ghamry, Heba I.
collection PubMed
description Researchers are constantly searching for drugs to combat the coronavirus pandemic caused by SARS-CoV-2, which has lasted for over two years. Natural compounds such as phenolic acids are being tested against Mpro and AAK1, which are key players in the SARS-CoV-2 life cycle. This research work aims to study the ability of a panel of natural phenolic acids to inhibit the virus's multiplication directly through Mpro and indirectly by affecting the adaptor-associated protein kinase-1 (AAK1). Pharmacophore mapping, molecular docking, and dynamic studies were conducted over 50 ns and 100 ns on a panel of 39 natural phenolic acids. Rosmarinic acid (16) on the Mpro receptor (− 16.33 kcal/mol) and tannic acid (17) on the AAK1 receptor (− 17.15 kcal/mol) exhibited the best docking energy against both receptors. These favourable docking score values were found to be superior to those of the co-crystallized ligands. Preclinical and clinical research is required before using them simultaneously to halt the COVID-19 life cycle in a synergistic manner.
format Online
Article
Text
id pubmed-10162004
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-101620042023-05-07 Evaluating the ability of some natural phenolic acids to target the main protease and AAK1 in SARS COV-2 Ghamry, Heba I. Belal, Amany El-Ashrey, Mohamed Kandeel Tawfik, Haytham O. Alsantali, Reem I. Obaidullah, Ahmad J. El-Mansi, Ahmed A. Abdelrahman, Doaa Sci Rep Article Researchers are constantly searching for drugs to combat the coronavirus pandemic caused by SARS-CoV-2, which has lasted for over two years. Natural compounds such as phenolic acids are being tested against Mpro and AAK1, which are key players in the SARS-CoV-2 life cycle. This research work aims to study the ability of a panel of natural phenolic acids to inhibit the virus's multiplication directly through Mpro and indirectly by affecting the adaptor-associated protein kinase-1 (AAK1). Pharmacophore mapping, molecular docking, and dynamic studies were conducted over 50 ns and 100 ns on a panel of 39 natural phenolic acids. Rosmarinic acid (16) on the Mpro receptor (− 16.33 kcal/mol) and tannic acid (17) on the AAK1 receptor (− 17.15 kcal/mol) exhibited the best docking energy against both receptors. These favourable docking score values were found to be superior to those of the co-crystallized ligands. Preclinical and clinical research is required before using them simultaneously to halt the COVID-19 life cycle in a synergistic manner. Nature Publishing Group UK 2023-05-05 /pmc/articles/PMC10162004/ /pubmed/37147518 http://dx.doi.org/10.1038/s41598-023-34189-6 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Ghamry, Heba I.
Belal, Amany
El-Ashrey, Mohamed Kandeel
Tawfik, Haytham O.
Alsantali, Reem I.
Obaidullah, Ahmad J.
El-Mansi, Ahmed A.
Abdelrahman, Doaa
Evaluating the ability of some natural phenolic acids to target the main protease and AAK1 in SARS COV-2
title Evaluating the ability of some natural phenolic acids to target the main protease and AAK1 in SARS COV-2
title_full Evaluating the ability of some natural phenolic acids to target the main protease and AAK1 in SARS COV-2
title_fullStr Evaluating the ability of some natural phenolic acids to target the main protease and AAK1 in SARS COV-2
title_full_unstemmed Evaluating the ability of some natural phenolic acids to target the main protease and AAK1 in SARS COV-2
title_short Evaluating the ability of some natural phenolic acids to target the main protease and AAK1 in SARS COV-2
title_sort evaluating the ability of some natural phenolic acids to target the main protease and aak1 in sars cov-2
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10162004/
https://www.ncbi.nlm.nih.gov/pubmed/37147518
http://dx.doi.org/10.1038/s41598-023-34189-6
work_keys_str_mv AT ghamryhebai evaluatingtheabilityofsomenaturalphenolicacidstotargetthemainproteaseandaak1insarscov2
AT belalamany evaluatingtheabilityofsomenaturalphenolicacidstotargetthemainproteaseandaak1insarscov2
AT elashreymohamedkandeel evaluatingtheabilityofsomenaturalphenolicacidstotargetthemainproteaseandaak1insarscov2
AT tawfikhaythamo evaluatingtheabilityofsomenaturalphenolicacidstotargetthemainproteaseandaak1insarscov2
AT alsantalireemi evaluatingtheabilityofsomenaturalphenolicacidstotargetthemainproteaseandaak1insarscov2
AT obaidullahahmadj evaluatingtheabilityofsomenaturalphenolicacidstotargetthemainproteaseandaak1insarscov2
AT elmansiahmeda evaluatingtheabilityofsomenaturalphenolicacidstotargetthemainproteaseandaak1insarscov2
AT abdelrahmandoaa evaluatingtheabilityofsomenaturalphenolicacidstotargetthemainproteaseandaak1insarscov2