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Reconstructing the pressure field around swimming fish using a physics-informed neural network

Fish detect predators, flow conditions, environments and each other through pressure signals. Lateral line ablation is often performed to understand the role of pressure sensing. In the present study, we propose a non-invasive method for reconstructing the instantaneous pressure field sensed by a fi...

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Autores principales: Calicchia, Michael A., Mittal, Rajat, Seo, Jung-Hee, Ni, Rui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Company of Biologists Ltd 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10163353/
https://www.ncbi.nlm.nih.gov/pubmed/37066991
http://dx.doi.org/10.1242/jeb.244983
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author Calicchia, Michael A.
Mittal, Rajat
Seo, Jung-Hee
Ni, Rui
author_facet Calicchia, Michael A.
Mittal, Rajat
Seo, Jung-Hee
Ni, Rui
author_sort Calicchia, Michael A.
collection PubMed
description Fish detect predators, flow conditions, environments and each other through pressure signals. Lateral line ablation is often performed to understand the role of pressure sensing. In the present study, we propose a non-invasive method for reconstructing the instantaneous pressure field sensed by a fish's lateral line system from two-dimensional particle image velocimetry (PIV) measurements. The method uses a physics-informed neural network (PINN) to predict an optimized solution for the pressure field near and on the fish's body that satisfies both the Navier–Stokes equations and the constraints put forward by the PIV measurements. The method was validated using a direct numerical simulation of a swimming mackerel, Scomber scombrus, and was applied to experimental data of a turning zebrafish, Danio rerio. The results demonstrate that this method is relatively insensitive to the spatio-temporal resolution of the PIV measurements and accurately reconstructs the pressure on the fish's body.
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spelling pubmed-101633532023-05-07 Reconstructing the pressure field around swimming fish using a physics-informed neural network Calicchia, Michael A. Mittal, Rajat Seo, Jung-Hee Ni, Rui J Exp Biol Methods & Techniques Fish detect predators, flow conditions, environments and each other through pressure signals. Lateral line ablation is often performed to understand the role of pressure sensing. In the present study, we propose a non-invasive method for reconstructing the instantaneous pressure field sensed by a fish's lateral line system from two-dimensional particle image velocimetry (PIV) measurements. The method uses a physics-informed neural network (PINN) to predict an optimized solution for the pressure field near and on the fish's body that satisfies both the Navier–Stokes equations and the constraints put forward by the PIV measurements. The method was validated using a direct numerical simulation of a swimming mackerel, Scomber scombrus, and was applied to experimental data of a turning zebrafish, Danio rerio. The results demonstrate that this method is relatively insensitive to the spatio-temporal resolution of the PIV measurements and accurately reconstructs the pressure on the fish's body. The Company of Biologists Ltd 2023-04-27 /pmc/articles/PMC10163353/ /pubmed/37066991 http://dx.doi.org/10.1242/jeb.244983 Text en © 2023. Published by The Company of Biologists Ltd https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution and reproduction in any medium provided that the original work is properly attributed.
spellingShingle Methods & Techniques
Calicchia, Michael A.
Mittal, Rajat
Seo, Jung-Hee
Ni, Rui
Reconstructing the pressure field around swimming fish using a physics-informed neural network
title Reconstructing the pressure field around swimming fish using a physics-informed neural network
title_full Reconstructing the pressure field around swimming fish using a physics-informed neural network
title_fullStr Reconstructing the pressure field around swimming fish using a physics-informed neural network
title_full_unstemmed Reconstructing the pressure field around swimming fish using a physics-informed neural network
title_short Reconstructing the pressure field around swimming fish using a physics-informed neural network
title_sort reconstructing the pressure field around swimming fish using a physics-informed neural network
topic Methods & Techniques
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10163353/
https://www.ncbi.nlm.nih.gov/pubmed/37066991
http://dx.doi.org/10.1242/jeb.244983
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