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Social network and genomic analysis of an OXA-48 carbapenemase-producing Enterobacterales hospital ward outbreak in Ireland, 2018–2019

BACKGROUND: Nosocomial transmission and outbreaks of carbapenemase-producing Enterobacterales (CPE) represent a challenge to healthcare systems. In July 2018, a CPE hospital ward outbreak was declared. Our aim was to investigate transmission patterns, using social network analysis and genomics in a...

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Autores principales: Domegan, Lisa, Brehony, Carina, Fitzpatrick, Fidelma, O'Connell, Karina, Dinesh, Binu, Cafferkey, Jacqueline, Burns, Karen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10164899/
https://www.ncbi.nlm.nih.gov/pubmed/37168234
http://dx.doi.org/10.1016/j.infpip.2023.100282
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author Domegan, Lisa
Brehony, Carina
Fitzpatrick, Fidelma
O'Connell, Karina
Dinesh, Binu
Cafferkey, Jacqueline
Burns, Karen
author_facet Domegan, Lisa
Brehony, Carina
Fitzpatrick, Fidelma
O'Connell, Karina
Dinesh, Binu
Cafferkey, Jacqueline
Burns, Karen
author_sort Domegan, Lisa
collection PubMed
description BACKGROUND: Nosocomial transmission and outbreaks of carbapenemase-producing Enterobacterales (CPE) represent a challenge to healthcare systems. In July 2018, a CPE hospital ward outbreak was declared. Our aim was to investigate transmission patterns, using social network analysis and genomics in a nosocomial CPE outbreak. METHODS: A retrospective descriptive analysis of all patients (cases and contacts) admitted to a ward experiencing a CPE outbreak (2018–2019) was undertaken. A case had a negative CPE admission screen, and subsequent positive test. A contact shared a multi-bed area and/or facility with a case (>4 hours). Social networks, including genomics data and ward locations, were constructed. Network metrics were analysed. FINDINGS: Forty-five cases and 844 contacts were analysed. The median age of cases was 78 years (IQR 67-83), 58% (n=26) were male and 100% had co-morbidities. The median outbreak ward length-of-stay (LOS) was 17 days (IQR 10-34). OXA-48 CPE was confirmed in all cases and from 26 environmental samples. Social networks identified clusters by time, gender and species/sequence type/plasmid. Network metrics indicated potential superspreading involving a subset of patients with behavioural issues. CONCLUSION: Social networks elucidated high resolution transmission patterns involving two related OXA-48 plasmids, multiple species/genotypes and potential super-spreading. Interventions prevented intra-hospital spread. An older patient cohort, extended hospital LOS and frequent intra-ward bed transfers, coupled with suboptimal ward infrastructure, likely prolonged this outbreak. We recommend social network analysis contemporaneously with genomics (on case and environmental samples) for complex nosocomial outbreaks and bespoke care plans for patients with behavioural issues on outbreak wards.
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spelling pubmed-101648992023-05-09 Social network and genomic analysis of an OXA-48 carbapenemase-producing Enterobacterales hospital ward outbreak in Ireland, 2018–2019 Domegan, Lisa Brehony, Carina Fitzpatrick, Fidelma O'Connell, Karina Dinesh, Binu Cafferkey, Jacqueline Burns, Karen Infect Prev Pract Outbreak Report BACKGROUND: Nosocomial transmission and outbreaks of carbapenemase-producing Enterobacterales (CPE) represent a challenge to healthcare systems. In July 2018, a CPE hospital ward outbreak was declared. Our aim was to investigate transmission patterns, using social network analysis and genomics in a nosocomial CPE outbreak. METHODS: A retrospective descriptive analysis of all patients (cases and contacts) admitted to a ward experiencing a CPE outbreak (2018–2019) was undertaken. A case had a negative CPE admission screen, and subsequent positive test. A contact shared a multi-bed area and/or facility with a case (>4 hours). Social networks, including genomics data and ward locations, were constructed. Network metrics were analysed. FINDINGS: Forty-five cases and 844 contacts were analysed. The median age of cases was 78 years (IQR 67-83), 58% (n=26) were male and 100% had co-morbidities. The median outbreak ward length-of-stay (LOS) was 17 days (IQR 10-34). OXA-48 CPE was confirmed in all cases and from 26 environmental samples. Social networks identified clusters by time, gender and species/sequence type/plasmid. Network metrics indicated potential superspreading involving a subset of patients with behavioural issues. CONCLUSION: Social networks elucidated high resolution transmission patterns involving two related OXA-48 plasmids, multiple species/genotypes and potential super-spreading. Interventions prevented intra-hospital spread. An older patient cohort, extended hospital LOS and frequent intra-ward bed transfers, coupled with suboptimal ward infrastructure, likely prolonged this outbreak. We recommend social network analysis contemporaneously with genomics (on case and environmental samples) for complex nosocomial outbreaks and bespoke care plans for patients with behavioural issues on outbreak wards. Elsevier 2023-04-08 /pmc/articles/PMC10164899/ /pubmed/37168234 http://dx.doi.org/10.1016/j.infpip.2023.100282 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Outbreak Report
Domegan, Lisa
Brehony, Carina
Fitzpatrick, Fidelma
O'Connell, Karina
Dinesh, Binu
Cafferkey, Jacqueline
Burns, Karen
Social network and genomic analysis of an OXA-48 carbapenemase-producing Enterobacterales hospital ward outbreak in Ireland, 2018–2019
title Social network and genomic analysis of an OXA-48 carbapenemase-producing Enterobacterales hospital ward outbreak in Ireland, 2018–2019
title_full Social network and genomic analysis of an OXA-48 carbapenemase-producing Enterobacterales hospital ward outbreak in Ireland, 2018–2019
title_fullStr Social network and genomic analysis of an OXA-48 carbapenemase-producing Enterobacterales hospital ward outbreak in Ireland, 2018–2019
title_full_unstemmed Social network and genomic analysis of an OXA-48 carbapenemase-producing Enterobacterales hospital ward outbreak in Ireland, 2018–2019
title_short Social network and genomic analysis of an OXA-48 carbapenemase-producing Enterobacterales hospital ward outbreak in Ireland, 2018–2019
title_sort social network and genomic analysis of an oxa-48 carbapenemase-producing enterobacterales hospital ward outbreak in ireland, 2018–2019
topic Outbreak Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10164899/
https://www.ncbi.nlm.nih.gov/pubmed/37168234
http://dx.doi.org/10.1016/j.infpip.2023.100282
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