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The potential for different computed tomography-based machine learning networks to automatically segment and differentiate pelvic and sacral osteosarcoma from Ewing’s sarcoma
BACKGROUND: This study aimed to explore optimal computed tomography (CT)-based machine learning and deep learning methods for the identification of pelvic and sacral osteosarcomas (OS) and Ewing’s sarcomas (ES). METHODS: A total of 185 patients with pathologically confirmed pelvic and sacral OS and...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10167450/ https://www.ncbi.nlm.nih.gov/pubmed/37179923 http://dx.doi.org/10.21037/qims-22-1042 |
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author | Yin, Ping Wang, Wenjia Wang, Sicong Liu, Tao Sun, Chao Liu, Xia Chen, Lei Hong, Nan |
author_facet | Yin, Ping Wang, Wenjia Wang, Sicong Liu, Tao Sun, Chao Liu, Xia Chen, Lei Hong, Nan |
author_sort | Yin, Ping |
collection | PubMed |
description | BACKGROUND: This study aimed to explore optimal computed tomography (CT)-based machine learning and deep learning methods for the identification of pelvic and sacral osteosarcomas (OS) and Ewing’s sarcomas (ES). METHODS: A total of 185 patients with pathologically confirmed pelvic and sacral OS and ES were analyzed. We first compared the performance of 9 radiomics-based machine learning models, 1 radiomics-based convolutional neural networks (CNNs) model, and 1 3-dimensional (3D) CNN model, respectively. We then proposed a 2-step no-new-Net (nnU-Net) model for the automatic segmentation and identification of OS and ES. The diagnoses by 3 radiologists were also obtained. The area under the receiver operating characteristic curve (AUC) and accuracy (ACC) were used to evaluate the different models. RESULTS: Age, tumor size, and tumor location showed significant differences between OS and ES (P<0.01). For the radiomics-based machine learning models, logistic regression (LR; AUC =0.716, ACC =0.660) performed best in the validation set. However, the radiomics-based CNN model had an AUC of 0.812 and ACC of 0.774 in the validation set, which were higher than those of the 3D CNN model (AUC =0.709, ACC =0.717). Among all the models, the nnU-Net model performed best, with an AUC of 0.835 and an ACC of 0.830 in the validation set, which was significantly higher than the primary physician’s diagnosis (ACCs ranged from 0.757 to 0.811) (P<0.01). CONCLUSIONS: The proposed nnU-Net model could be an end-to-end, non-invasive, and accurate auxiliary diagnostic tool for the differentiation of pelvic and sacral OS and ES. |
format | Online Article Text |
id | pubmed-10167450 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-101674502023-05-10 The potential for different computed tomography-based machine learning networks to automatically segment and differentiate pelvic and sacral osteosarcoma from Ewing’s sarcoma Yin, Ping Wang, Wenjia Wang, Sicong Liu, Tao Sun, Chao Liu, Xia Chen, Lei Hong, Nan Quant Imaging Med Surg Original Article BACKGROUND: This study aimed to explore optimal computed tomography (CT)-based machine learning and deep learning methods for the identification of pelvic and sacral osteosarcomas (OS) and Ewing’s sarcomas (ES). METHODS: A total of 185 patients with pathologically confirmed pelvic and sacral OS and ES were analyzed. We first compared the performance of 9 radiomics-based machine learning models, 1 radiomics-based convolutional neural networks (CNNs) model, and 1 3-dimensional (3D) CNN model, respectively. We then proposed a 2-step no-new-Net (nnU-Net) model for the automatic segmentation and identification of OS and ES. The diagnoses by 3 radiologists were also obtained. The area under the receiver operating characteristic curve (AUC) and accuracy (ACC) were used to evaluate the different models. RESULTS: Age, tumor size, and tumor location showed significant differences between OS and ES (P<0.01). For the radiomics-based machine learning models, logistic regression (LR; AUC =0.716, ACC =0.660) performed best in the validation set. However, the radiomics-based CNN model had an AUC of 0.812 and ACC of 0.774 in the validation set, which were higher than those of the 3D CNN model (AUC =0.709, ACC =0.717). Among all the models, the nnU-Net model performed best, with an AUC of 0.835 and an ACC of 0.830 in the validation set, which was significantly higher than the primary physician’s diagnosis (ACCs ranged from 0.757 to 0.811) (P<0.01). CONCLUSIONS: The proposed nnU-Net model could be an end-to-end, non-invasive, and accurate auxiliary diagnostic tool for the differentiation of pelvic and sacral OS and ES. AME Publishing Company 2023-04-13 2023-05-01 /pmc/articles/PMC10167450/ /pubmed/37179923 http://dx.doi.org/10.21037/qims-22-1042 Text en 2023 Quantitative Imaging in Medicine and Surgery. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Original Article Yin, Ping Wang, Wenjia Wang, Sicong Liu, Tao Sun, Chao Liu, Xia Chen, Lei Hong, Nan The potential for different computed tomography-based machine learning networks to automatically segment and differentiate pelvic and sacral osteosarcoma from Ewing’s sarcoma |
title | The potential for different computed tomography-based machine learning networks to automatically segment and differentiate pelvic and sacral osteosarcoma from Ewing’s sarcoma |
title_full | The potential for different computed tomography-based machine learning networks to automatically segment and differentiate pelvic and sacral osteosarcoma from Ewing’s sarcoma |
title_fullStr | The potential for different computed tomography-based machine learning networks to automatically segment and differentiate pelvic and sacral osteosarcoma from Ewing’s sarcoma |
title_full_unstemmed | The potential for different computed tomography-based machine learning networks to automatically segment and differentiate pelvic and sacral osteosarcoma from Ewing’s sarcoma |
title_short | The potential for different computed tomography-based machine learning networks to automatically segment and differentiate pelvic and sacral osteosarcoma from Ewing’s sarcoma |
title_sort | potential for different computed tomography-based machine learning networks to automatically segment and differentiate pelvic and sacral osteosarcoma from ewing’s sarcoma |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10167450/ https://www.ncbi.nlm.nih.gov/pubmed/37179923 http://dx.doi.org/10.21037/qims-22-1042 |
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