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Reference material development for detection of human respiratory syncytial virus using digital PCR

Nucleic acid testing is a powerful tool for the detection of various pathogens. Respiratory syncytial virus (RSV) is a major cause of acute respiratory infection, especially in young children and infants. To improve the confidence and reliability of nucleic acid testing results for RSV, reference ma...

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Autores principales: Niu, Chunyan, Dong, Lianhua, Zhang, Jiejie, Wang, Di, Gao, Yunhua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10169126/
https://www.ncbi.nlm.nih.gov/pubmed/37160423
http://dx.doi.org/10.1007/s00216-023-04704-9
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author Niu, Chunyan
Dong, Lianhua
Zhang, Jiejie
Wang, Di
Gao, Yunhua
author_facet Niu, Chunyan
Dong, Lianhua
Zhang, Jiejie
Wang, Di
Gao, Yunhua
author_sort Niu, Chunyan
collection PubMed
description Nucleic acid testing is a powerful tool for the detection of various pathogens. Respiratory syncytial virus (RSV) is a major cause of acute respiratory infection, especially in young children and infants. To improve the confidence and reliability of nucleic acid testing results for RSV, reference materials (RMs) of both type A and B of RSV were developed by the National Institute of Metrology, China, code numbers NIM-RM 4057 and 4058. The reference material was composed of in vitro transcribed RNA containing the nucleocapsid (N) gene, matrix (M) gene, and partial polymerase (L) gene of RSV. A duplex reverse transcription digital PCR method was established with limit of blank (LoB), limit of detection (LoD) and limit of quantification (LoQ) of 2, 5, and 23 copies per reaction for RSV-A and 4, 8, and 20 copies per reaction for RSV-B. The certified value and expanded uncertainty (U, k = 2) of the two RMs were determined to be (6.1 ± 1.4) × 10(4) copies/μL for RSV-A and (5.3 ± 1.2) × 10(4) copies/μL for RSV-B. The developed RMs can be used as standards to evaluate the performance of RSV detection assays. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00216-023-04704-9.
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spelling pubmed-101691262023-05-11 Reference material development for detection of human respiratory syncytial virus using digital PCR Niu, Chunyan Dong, Lianhua Zhang, Jiejie Wang, Di Gao, Yunhua Anal Bioanal Chem Communication Nucleic acid testing is a powerful tool for the detection of various pathogens. Respiratory syncytial virus (RSV) is a major cause of acute respiratory infection, especially in young children and infants. To improve the confidence and reliability of nucleic acid testing results for RSV, reference materials (RMs) of both type A and B of RSV were developed by the National Institute of Metrology, China, code numbers NIM-RM 4057 and 4058. The reference material was composed of in vitro transcribed RNA containing the nucleocapsid (N) gene, matrix (M) gene, and partial polymerase (L) gene of RSV. A duplex reverse transcription digital PCR method was established with limit of blank (LoB), limit of detection (LoD) and limit of quantification (LoQ) of 2, 5, and 23 copies per reaction for RSV-A and 4, 8, and 20 copies per reaction for RSV-B. The certified value and expanded uncertainty (U, k = 2) of the two RMs were determined to be (6.1 ± 1.4) × 10(4) copies/μL for RSV-A and (5.3 ± 1.2) × 10(4) copies/μL for RSV-B. The developed RMs can be used as standards to evaluate the performance of RSV detection assays. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00216-023-04704-9. Springer Berlin Heidelberg 2023-05-09 /pmc/articles/PMC10169126/ /pubmed/37160423 http://dx.doi.org/10.1007/s00216-023-04704-9 Text en © Springer-Verlag GmbH Germany, part of Springer Nature 2023 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Communication
Niu, Chunyan
Dong, Lianhua
Zhang, Jiejie
Wang, Di
Gao, Yunhua
Reference material development for detection of human respiratory syncytial virus using digital PCR
title Reference material development for detection of human respiratory syncytial virus using digital PCR
title_full Reference material development for detection of human respiratory syncytial virus using digital PCR
title_fullStr Reference material development for detection of human respiratory syncytial virus using digital PCR
title_full_unstemmed Reference material development for detection of human respiratory syncytial virus using digital PCR
title_short Reference material development for detection of human respiratory syncytial virus using digital PCR
title_sort reference material development for detection of human respiratory syncytial virus using digital pcr
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10169126/
https://www.ncbi.nlm.nih.gov/pubmed/37160423
http://dx.doi.org/10.1007/s00216-023-04704-9
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