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Genome-wide analysis of heavy metal ATPases (HMAs) in Poaceae species and their potential role against copper stress in Triticum aestivum

Plants require copper for normal growth and development and have evolved an efficient system for copper management based on transport proteins such as P(1B)-ATPases, also known as heavy metal ATPases (HMAs). Here, we report HMAs in eleven different Poaceae species, including wheat. Furthermore, the...

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Autores principales: Batool, Tuba Sharf, Aslam, Roohi, Gul, Alvina, Paracha, Rehan Zafar, Ilyas, Mahnoor, De Abreu, Kathryn, Munir, Faiza, Amir, Rabia, Williams, Lorraine E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10170112/
https://www.ncbi.nlm.nih.gov/pubmed/37160901
http://dx.doi.org/10.1038/s41598-023-32023-7
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author Batool, Tuba Sharf
Aslam, Roohi
Gul, Alvina
Paracha, Rehan Zafar
Ilyas, Mahnoor
De Abreu, Kathryn
Munir, Faiza
Amir, Rabia
Williams, Lorraine E.
author_facet Batool, Tuba Sharf
Aslam, Roohi
Gul, Alvina
Paracha, Rehan Zafar
Ilyas, Mahnoor
De Abreu, Kathryn
Munir, Faiza
Amir, Rabia
Williams, Lorraine E.
author_sort Batool, Tuba Sharf
collection PubMed
description Plants require copper for normal growth and development and have evolved an efficient system for copper management based on transport proteins such as P(1B)-ATPases, also known as heavy metal ATPases (HMAs). Here, we report HMAs in eleven different Poaceae species, including wheat. Furthermore, the possible role of wheat HMAs in copper stress was investigated. BlastP searches identified 27 HMAs in wheat, and phylogenetic analysis based on the Maximum Likelihood method demonstrated a separation into four distinct clades. Conserved motif analysis, domain identification, gene structure, and transmembrane helices number were also identified for wheat HMAs using computational tools. Wheat seedlings grown hydroponically were subjected to elevated copper and demonstrated toxicity symptoms with effects on fresh weight and changes in expression of selected HMAs TaHMA7, TaHMA8, and TaHMA9 were upregulated in response to elevated copper, suggesting a role in wheat copper homeostasis. Further investigations on these heavy metal pumps can provide insight into strategies for enhancing crop heavy metal tolerance in the face of heavy metal pollution.
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spelling pubmed-101701122023-05-11 Genome-wide analysis of heavy metal ATPases (HMAs) in Poaceae species and their potential role against copper stress in Triticum aestivum Batool, Tuba Sharf Aslam, Roohi Gul, Alvina Paracha, Rehan Zafar Ilyas, Mahnoor De Abreu, Kathryn Munir, Faiza Amir, Rabia Williams, Lorraine E. Sci Rep Article Plants require copper for normal growth and development and have evolved an efficient system for copper management based on transport proteins such as P(1B)-ATPases, also known as heavy metal ATPases (HMAs). Here, we report HMAs in eleven different Poaceae species, including wheat. Furthermore, the possible role of wheat HMAs in copper stress was investigated. BlastP searches identified 27 HMAs in wheat, and phylogenetic analysis based on the Maximum Likelihood method demonstrated a separation into four distinct clades. Conserved motif analysis, domain identification, gene structure, and transmembrane helices number were also identified for wheat HMAs using computational tools. Wheat seedlings grown hydroponically were subjected to elevated copper and demonstrated toxicity symptoms with effects on fresh weight and changes in expression of selected HMAs TaHMA7, TaHMA8, and TaHMA9 were upregulated in response to elevated copper, suggesting a role in wheat copper homeostasis. Further investigations on these heavy metal pumps can provide insight into strategies for enhancing crop heavy metal tolerance in the face of heavy metal pollution. Nature Publishing Group UK 2023-05-09 /pmc/articles/PMC10170112/ /pubmed/37160901 http://dx.doi.org/10.1038/s41598-023-32023-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Batool, Tuba Sharf
Aslam, Roohi
Gul, Alvina
Paracha, Rehan Zafar
Ilyas, Mahnoor
De Abreu, Kathryn
Munir, Faiza
Amir, Rabia
Williams, Lorraine E.
Genome-wide analysis of heavy metal ATPases (HMAs) in Poaceae species and their potential role against copper stress in Triticum aestivum
title Genome-wide analysis of heavy metal ATPases (HMAs) in Poaceae species and their potential role against copper stress in Triticum aestivum
title_full Genome-wide analysis of heavy metal ATPases (HMAs) in Poaceae species and their potential role against copper stress in Triticum aestivum
title_fullStr Genome-wide analysis of heavy metal ATPases (HMAs) in Poaceae species and their potential role against copper stress in Triticum aestivum
title_full_unstemmed Genome-wide analysis of heavy metal ATPases (HMAs) in Poaceae species and their potential role against copper stress in Triticum aestivum
title_short Genome-wide analysis of heavy metal ATPases (HMAs) in Poaceae species and their potential role against copper stress in Triticum aestivum
title_sort genome-wide analysis of heavy metal atpases (hmas) in poaceae species and their potential role against copper stress in triticum aestivum
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10170112/
https://www.ncbi.nlm.nih.gov/pubmed/37160901
http://dx.doi.org/10.1038/s41598-023-32023-7
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