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Epigenetic opportunities for evolutionary computation
Evolutionary computation is a group of biologically inspired algorithms used to solve complex optimization problems. It can be split into evolutionary algorithms, which take inspiration from genetic inheritance, and swarm intelligence algorithms, that take inspiration from cultural inheritance. Howe...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10170609/ https://www.ncbi.nlm.nih.gov/pubmed/37181799 http://dx.doi.org/10.1098/rsos.221256 |
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author | Yuen, Sizhe Ezard, Thomas H. G. Sobey, Adam J. |
author_facet | Yuen, Sizhe Ezard, Thomas H. G. Sobey, Adam J. |
author_sort | Yuen, Sizhe |
collection | PubMed |
description | Evolutionary computation is a group of biologically inspired algorithms used to solve complex optimization problems. It can be split into evolutionary algorithms, which take inspiration from genetic inheritance, and swarm intelligence algorithms, that take inspiration from cultural inheritance. However, much of the modern evolutionary literature remains relatively unexplored. To understand which evolutionary mechanisms have been considered, and which have been overlooked, this paper breaks down successful bioinspired algorithms under a contemporary biological framework based on the extended evolutionary synthesis, an extension of the classical, genetics focused, modern synthesis. Although the idea of the extended evolutionary synthesis has not been fully accepted in evolutionary theory, it presents many interesting concepts that could provide benefits to evolutionary computation. The analysis shows that Darwinism and the modern synthesis have been incorporated into evolutionary computation but the extended evolutionary synthesis has been broadly ignored beyond: cultural inheritance, incorporated in the sub-set of swarm intelligence algorithms, evolvability, through covariance matrix adaptation evolution strategy (CMA-ES), and multilevel selection, through multilevel selection genetic algorithm (MLSGA). The framework shows a gap in epigenetic inheritance for evolutionary computation, despite being a key building block in modern interpretations of evolution. This leaves a diverse range of biologically inspired mechanisms as low hanging fruit that should be explored further within evolutionary computation and illustrates the potential of epigenetic based approaches through the recent benchmarks in the literature. |
format | Online Article Text |
id | pubmed-10170609 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-101706092023-05-11 Epigenetic opportunities for evolutionary computation Yuen, Sizhe Ezard, Thomas H. G. Sobey, Adam J. R Soc Open Sci Computer Science and Artificial Intelligence Evolutionary computation is a group of biologically inspired algorithms used to solve complex optimization problems. It can be split into evolutionary algorithms, which take inspiration from genetic inheritance, and swarm intelligence algorithms, that take inspiration from cultural inheritance. However, much of the modern evolutionary literature remains relatively unexplored. To understand which evolutionary mechanisms have been considered, and which have been overlooked, this paper breaks down successful bioinspired algorithms under a contemporary biological framework based on the extended evolutionary synthesis, an extension of the classical, genetics focused, modern synthesis. Although the idea of the extended evolutionary synthesis has not been fully accepted in evolutionary theory, it presents many interesting concepts that could provide benefits to evolutionary computation. The analysis shows that Darwinism and the modern synthesis have been incorporated into evolutionary computation but the extended evolutionary synthesis has been broadly ignored beyond: cultural inheritance, incorporated in the sub-set of swarm intelligence algorithms, evolvability, through covariance matrix adaptation evolution strategy (CMA-ES), and multilevel selection, through multilevel selection genetic algorithm (MLSGA). The framework shows a gap in epigenetic inheritance for evolutionary computation, despite being a key building block in modern interpretations of evolution. This leaves a diverse range of biologically inspired mechanisms as low hanging fruit that should be explored further within evolutionary computation and illustrates the potential of epigenetic based approaches through the recent benchmarks in the literature. The Royal Society 2023-05-10 /pmc/articles/PMC10170609/ /pubmed/37181799 http://dx.doi.org/10.1098/rsos.221256 Text en © 2023 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Computer Science and Artificial Intelligence Yuen, Sizhe Ezard, Thomas H. G. Sobey, Adam J. Epigenetic opportunities for evolutionary computation |
title | Epigenetic opportunities for evolutionary computation |
title_full | Epigenetic opportunities for evolutionary computation |
title_fullStr | Epigenetic opportunities for evolutionary computation |
title_full_unstemmed | Epigenetic opportunities for evolutionary computation |
title_short | Epigenetic opportunities for evolutionary computation |
title_sort | epigenetic opportunities for evolutionary computation |
topic | Computer Science and Artificial Intelligence |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10170609/ https://www.ncbi.nlm.nih.gov/pubmed/37181799 http://dx.doi.org/10.1098/rsos.221256 |
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