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Time to relapse in chronic lymphocytic leukemia and DNA-methylation-based biological age

Chronic lymphocytic leukemia (CLL) is a mature B cell neoplasm with a predilection for older individuals. While previous studies have identified epigenetic signatures associated with CLL, whether age-related DNA methylation changes modulate CLL relapse remains elusive. In this study, we examined the...

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Autores principales: Nannini, Drew R., Cortese, Rene, Egwom, Peter, Palaniyandi, Senthilnathan, Hildebrandt, Gerhard C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10170738/
https://www.ncbi.nlm.nih.gov/pubmed/37165442
http://dx.doi.org/10.1186/s13148-023-01496-8
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author Nannini, Drew R.
Cortese, Rene
Egwom, Peter
Palaniyandi, Senthilnathan
Hildebrandt, Gerhard C.
author_facet Nannini, Drew R.
Cortese, Rene
Egwom, Peter
Palaniyandi, Senthilnathan
Hildebrandt, Gerhard C.
author_sort Nannini, Drew R.
collection PubMed
description Chronic lymphocytic leukemia (CLL) is a mature B cell neoplasm with a predilection for older individuals. While previous studies have identified epigenetic signatures associated with CLL, whether age-related DNA methylation changes modulate CLL relapse remains elusive. In this study, we examined the association between epigenetic age acceleration and time to CLL relapse in a publicly available dataset. DNA methylation profiling of 35 CLL patients prior to initiating chemoimmunotherapy was performed using the Infinium HumanMethylation450 BeadChip. Four epigenetic age acceleration metrics (intrinsic epigenetic age acceleration [IEAA], extrinsic epigenetic age acceleration [EEAA], PhenoAge acceleration [PhenoAA], and GrimAge acceleration [GrimAA]) were estimated from blood DNA methylation levels. Linear, quantile, and logistic regression and receiver operating characteristic curve analyses were conducted to assess the association between each epigenetic age metric and time to CLL relapse. EEAA (p = 0.011) and PhenoAA (p = 0.046) were negatively and GrimAA (p = 0.040) was positively associated with time to CLL relapse. Simultaneous assessment of EEAA and GrimAA in male patients distinguished patients who relapsed early from patients who relapsed later (p = 0.039). No associations were observed with IEAA. These findings suggest epigenetic age acceleration prior to chemoimmunotherapy initiation is associated with time to CLL relapse. Our results provide novel insight into the association between age-related DNA methylation changes and CLL relapse and may serve has biomarkers for treatment relapse, and potentially, treatment selection. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13148-023-01496-8.
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spelling pubmed-101707382023-05-11 Time to relapse in chronic lymphocytic leukemia and DNA-methylation-based biological age Nannini, Drew R. Cortese, Rene Egwom, Peter Palaniyandi, Senthilnathan Hildebrandt, Gerhard C. Clin Epigenetics Research Chronic lymphocytic leukemia (CLL) is a mature B cell neoplasm with a predilection for older individuals. While previous studies have identified epigenetic signatures associated with CLL, whether age-related DNA methylation changes modulate CLL relapse remains elusive. In this study, we examined the association between epigenetic age acceleration and time to CLL relapse in a publicly available dataset. DNA methylation profiling of 35 CLL patients prior to initiating chemoimmunotherapy was performed using the Infinium HumanMethylation450 BeadChip. Four epigenetic age acceleration metrics (intrinsic epigenetic age acceleration [IEAA], extrinsic epigenetic age acceleration [EEAA], PhenoAge acceleration [PhenoAA], and GrimAge acceleration [GrimAA]) were estimated from blood DNA methylation levels. Linear, quantile, and logistic regression and receiver operating characteristic curve analyses were conducted to assess the association between each epigenetic age metric and time to CLL relapse. EEAA (p = 0.011) and PhenoAA (p = 0.046) were negatively and GrimAA (p = 0.040) was positively associated with time to CLL relapse. Simultaneous assessment of EEAA and GrimAA in male patients distinguished patients who relapsed early from patients who relapsed later (p = 0.039). No associations were observed with IEAA. These findings suggest epigenetic age acceleration prior to chemoimmunotherapy initiation is associated with time to CLL relapse. Our results provide novel insight into the association between age-related DNA methylation changes and CLL relapse and may serve has biomarkers for treatment relapse, and potentially, treatment selection. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13148-023-01496-8. BioMed Central 2023-05-10 /pmc/articles/PMC10170738/ /pubmed/37165442 http://dx.doi.org/10.1186/s13148-023-01496-8 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Nannini, Drew R.
Cortese, Rene
Egwom, Peter
Palaniyandi, Senthilnathan
Hildebrandt, Gerhard C.
Time to relapse in chronic lymphocytic leukemia and DNA-methylation-based biological age
title Time to relapse in chronic lymphocytic leukemia and DNA-methylation-based biological age
title_full Time to relapse in chronic lymphocytic leukemia and DNA-methylation-based biological age
title_fullStr Time to relapse in chronic lymphocytic leukemia and DNA-methylation-based biological age
title_full_unstemmed Time to relapse in chronic lymphocytic leukemia and DNA-methylation-based biological age
title_short Time to relapse in chronic lymphocytic leukemia and DNA-methylation-based biological age
title_sort time to relapse in chronic lymphocytic leukemia and dna-methylation-based biological age
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10170738/
https://www.ncbi.nlm.nih.gov/pubmed/37165442
http://dx.doi.org/10.1186/s13148-023-01496-8
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