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Designing negative feedback loops in enzymatic coacervate droplets

Membraneless organelles within the living cell use phase separation of biomolecules coupled with enzymatic reactions to regulate cellular processes. The diverse functions of these biomolecular condensates motivate the pursuit of simpler in vitro models that exhibit primitive forms of self-regulation...

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Autores principales: Modi, Nisha, Chen, Siwei, Adjei, Imelda N. A., Franco, Briana L., Bishop, Kyle J. M., Obermeyer, Allie C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10171067/
https://www.ncbi.nlm.nih.gov/pubmed/37181760
http://dx.doi.org/10.1039/d2sc03838b
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author Modi, Nisha
Chen, Siwei
Adjei, Imelda N. A.
Franco, Briana L.
Bishop, Kyle J. M.
Obermeyer, Allie C.
author_facet Modi, Nisha
Chen, Siwei
Adjei, Imelda N. A.
Franco, Briana L.
Bishop, Kyle J. M.
Obermeyer, Allie C.
author_sort Modi, Nisha
collection PubMed
description Membraneless organelles within the living cell use phase separation of biomolecules coupled with enzymatic reactions to regulate cellular processes. The diverse functions of these biomolecular condensates motivate the pursuit of simpler in vitro models that exhibit primitive forms of self-regulation based on internal feedback mechanisms. Here, we investigate one such model based on complex coacervation of the enzyme catalase with an oppositely charge polyelectrolyte DEAE-dextran to form pH-responsive catalytic droplets. Upon addition of hydrogen peroxide “fuel”, enzyme activity localized within the droplets causes a rapid increase in the pH. Under appropriate conditions, this reaction-induced pH change triggers coacervate dissolution owing to its pH-responsive phase behavior. Notably, this destabilizing effect of the enzymatic reaction on phase separation depends on droplet size owing to the diffusive delivery and removal of reaction components. Reaction-diffusion models informed by the experimental data show that larger drops support larger changes in the local pH thereby enhancing their dissolution relative to smaller droplets. Together, these results provide a basis for achieving droplet size control based on negative feedback between pH-dependent phase separation and pH-changing enzymatic reactions.
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spelling pubmed-101710672023-05-11 Designing negative feedback loops in enzymatic coacervate droplets Modi, Nisha Chen, Siwei Adjei, Imelda N. A. Franco, Briana L. Bishop, Kyle J. M. Obermeyer, Allie C. Chem Sci Chemistry Membraneless organelles within the living cell use phase separation of biomolecules coupled with enzymatic reactions to regulate cellular processes. The diverse functions of these biomolecular condensates motivate the pursuit of simpler in vitro models that exhibit primitive forms of self-regulation based on internal feedback mechanisms. Here, we investigate one such model based on complex coacervation of the enzyme catalase with an oppositely charge polyelectrolyte DEAE-dextran to form pH-responsive catalytic droplets. Upon addition of hydrogen peroxide “fuel”, enzyme activity localized within the droplets causes a rapid increase in the pH. Under appropriate conditions, this reaction-induced pH change triggers coacervate dissolution owing to its pH-responsive phase behavior. Notably, this destabilizing effect of the enzymatic reaction on phase separation depends on droplet size owing to the diffusive delivery and removal of reaction components. Reaction-diffusion models informed by the experimental data show that larger drops support larger changes in the local pH thereby enhancing their dissolution relative to smaller droplets. Together, these results provide a basis for achieving droplet size control based on negative feedback between pH-dependent phase separation and pH-changing enzymatic reactions. The Royal Society of Chemistry 2023-04-19 /pmc/articles/PMC10171067/ /pubmed/37181760 http://dx.doi.org/10.1039/d2sc03838b Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Modi, Nisha
Chen, Siwei
Adjei, Imelda N. A.
Franco, Briana L.
Bishop, Kyle J. M.
Obermeyer, Allie C.
Designing negative feedback loops in enzymatic coacervate droplets
title Designing negative feedback loops in enzymatic coacervate droplets
title_full Designing negative feedback loops in enzymatic coacervate droplets
title_fullStr Designing negative feedback loops in enzymatic coacervate droplets
title_full_unstemmed Designing negative feedback loops in enzymatic coacervate droplets
title_short Designing negative feedback loops in enzymatic coacervate droplets
title_sort designing negative feedback loops in enzymatic coacervate droplets
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10171067/
https://www.ncbi.nlm.nih.gov/pubmed/37181760
http://dx.doi.org/10.1039/d2sc03838b
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