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Designing negative feedback loops in enzymatic coacervate droplets
Membraneless organelles within the living cell use phase separation of biomolecules coupled with enzymatic reactions to regulate cellular processes. The diverse functions of these biomolecular condensates motivate the pursuit of simpler in vitro models that exhibit primitive forms of self-regulation...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10171067/ https://www.ncbi.nlm.nih.gov/pubmed/37181760 http://dx.doi.org/10.1039/d2sc03838b |
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author | Modi, Nisha Chen, Siwei Adjei, Imelda N. A. Franco, Briana L. Bishop, Kyle J. M. Obermeyer, Allie C. |
author_facet | Modi, Nisha Chen, Siwei Adjei, Imelda N. A. Franco, Briana L. Bishop, Kyle J. M. Obermeyer, Allie C. |
author_sort | Modi, Nisha |
collection | PubMed |
description | Membraneless organelles within the living cell use phase separation of biomolecules coupled with enzymatic reactions to regulate cellular processes. The diverse functions of these biomolecular condensates motivate the pursuit of simpler in vitro models that exhibit primitive forms of self-regulation based on internal feedback mechanisms. Here, we investigate one such model based on complex coacervation of the enzyme catalase with an oppositely charge polyelectrolyte DEAE-dextran to form pH-responsive catalytic droplets. Upon addition of hydrogen peroxide “fuel”, enzyme activity localized within the droplets causes a rapid increase in the pH. Under appropriate conditions, this reaction-induced pH change triggers coacervate dissolution owing to its pH-responsive phase behavior. Notably, this destabilizing effect of the enzymatic reaction on phase separation depends on droplet size owing to the diffusive delivery and removal of reaction components. Reaction-diffusion models informed by the experimental data show that larger drops support larger changes in the local pH thereby enhancing their dissolution relative to smaller droplets. Together, these results provide a basis for achieving droplet size control based on negative feedback between pH-dependent phase separation and pH-changing enzymatic reactions. |
format | Online Article Text |
id | pubmed-10171067 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-101710672023-05-11 Designing negative feedback loops in enzymatic coacervate droplets Modi, Nisha Chen, Siwei Adjei, Imelda N. A. Franco, Briana L. Bishop, Kyle J. M. Obermeyer, Allie C. Chem Sci Chemistry Membraneless organelles within the living cell use phase separation of biomolecules coupled with enzymatic reactions to regulate cellular processes. The diverse functions of these biomolecular condensates motivate the pursuit of simpler in vitro models that exhibit primitive forms of self-regulation based on internal feedback mechanisms. Here, we investigate one such model based on complex coacervation of the enzyme catalase with an oppositely charge polyelectrolyte DEAE-dextran to form pH-responsive catalytic droplets. Upon addition of hydrogen peroxide “fuel”, enzyme activity localized within the droplets causes a rapid increase in the pH. Under appropriate conditions, this reaction-induced pH change triggers coacervate dissolution owing to its pH-responsive phase behavior. Notably, this destabilizing effect of the enzymatic reaction on phase separation depends on droplet size owing to the diffusive delivery and removal of reaction components. Reaction-diffusion models informed by the experimental data show that larger drops support larger changes in the local pH thereby enhancing their dissolution relative to smaller droplets. Together, these results provide a basis for achieving droplet size control based on negative feedback between pH-dependent phase separation and pH-changing enzymatic reactions. The Royal Society of Chemistry 2023-04-19 /pmc/articles/PMC10171067/ /pubmed/37181760 http://dx.doi.org/10.1039/d2sc03838b Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/ |
spellingShingle | Chemistry Modi, Nisha Chen, Siwei Adjei, Imelda N. A. Franco, Briana L. Bishop, Kyle J. M. Obermeyer, Allie C. Designing negative feedback loops in enzymatic coacervate droplets |
title | Designing negative feedback loops in enzymatic coacervate droplets |
title_full | Designing negative feedback loops in enzymatic coacervate droplets |
title_fullStr | Designing negative feedback loops in enzymatic coacervate droplets |
title_full_unstemmed | Designing negative feedback loops in enzymatic coacervate droplets |
title_short | Designing negative feedback loops in enzymatic coacervate droplets |
title_sort | designing negative feedback loops in enzymatic coacervate droplets |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10171067/ https://www.ncbi.nlm.nih.gov/pubmed/37181760 http://dx.doi.org/10.1039/d2sc03838b |
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