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Cyclohexane plastic phase I: single-crystal diffraction images and new structural model
The plastic phase of cyclohexane (polymorph I) was studied by Kahn and co-workers, without achieving a satisfactory determination of the atomic coordinates [Kahn et al. (1973). Acta Cryst. B29, 131–138]. The positions of the C atoms cannot be determined directly as a consequence of the disorder in...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10171323/ https://www.ncbi.nlm.nih.gov/pubmed/37180346 http://dx.doi.org/10.1107/S2414314623001141 |
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author | Bernès, Sylvain Camargo, Sebastian |
author_facet | Bernès, Sylvain Camargo, Sebastian |
author_sort | Bernès, Sylvain |
collection | PubMed |
description | The plastic phase of cyclohexane (polymorph I) was studied by Kahn and co-workers, without achieving a satisfactory determination of the atomic coordinates [Kahn et al. (1973). Acta Cryst. B29, 131–138]. The positions of the C atoms cannot be determined directly as a consequence of the disorder in a high-symmetry space group, an inherent feature of plastic materials. Given this situation, the building of a polyhedron describing the disorder was the main tool for determining the molecular structure in the present work. Based on the shape of reflections {111}, {200} and {113} in space group Fm 3 m, we assumed that cyclohexane is disordered through the action of rotation group 432. The polyhedral cluster of disordered molecules is then a rhombic dodecahedron centred on the nodes of an fcc Bravais lattice. The vertices of this polyhedron are the positions of C atoms for the cyclohexane molecule, which is disordered over 24 positions. With such a model, the asymmetric unit is reduced to two C atoms placed on special positions, and an acceptable fit between the observed and calculated structure factors is obtained. [Image: see text] |
format | Online Article Text |
id | pubmed-10171323 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-101713232023-05-11 Cyclohexane plastic phase I: single-crystal diffraction images and new structural model Bernès, Sylvain Camargo, Sebastian IUCrdata Raw Data Letters The plastic phase of cyclohexane (polymorph I) was studied by Kahn and co-workers, without achieving a satisfactory determination of the atomic coordinates [Kahn et al. (1973). Acta Cryst. B29, 131–138]. The positions of the C atoms cannot be determined directly as a consequence of the disorder in a high-symmetry space group, an inherent feature of plastic materials. Given this situation, the building of a polyhedron describing the disorder was the main tool for determining the molecular structure in the present work. Based on the shape of reflections {111}, {200} and {113} in space group Fm 3 m, we assumed that cyclohexane is disordered through the action of rotation group 432. The polyhedral cluster of disordered molecules is then a rhombic dodecahedron centred on the nodes of an fcc Bravais lattice. The vertices of this polyhedron are the positions of C atoms for the cyclohexane molecule, which is disordered over 24 positions. With such a model, the asymmetric unit is reduced to two C atoms placed on special positions, and an acceptable fit between the observed and calculated structure factors is obtained. [Image: see text] International Union of Crystallography 2023-03-02 /pmc/articles/PMC10171323/ /pubmed/37180346 http://dx.doi.org/10.1107/S2414314623001141 Text en © Bernes and Camargo 2023 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Raw Data Letters Bernès, Sylvain Camargo, Sebastian Cyclohexane plastic phase I: single-crystal diffraction images and new structural model |
title | Cyclohexane plastic phase I: single-crystal diffraction images and new structural model |
title_full | Cyclohexane plastic phase I: single-crystal diffraction images and new structural model |
title_fullStr | Cyclohexane plastic phase I: single-crystal diffraction images and new structural model |
title_full_unstemmed | Cyclohexane plastic phase I: single-crystal diffraction images and new structural model |
title_short | Cyclohexane plastic phase I: single-crystal diffraction images and new structural model |
title_sort | cyclohexane plastic phase i: single-crystal diffraction images and new structural model |
topic | Raw Data Letters |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10171323/ https://www.ncbi.nlm.nih.gov/pubmed/37180346 http://dx.doi.org/10.1107/S2414314623001141 |
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