Cargando…

Cyclo­hexane plastic phase I: single-crystal diffraction images and new structural model

The plastic phase of cyclohexane (polymorph I) was studied by Kahn and co-workers, without achieving a satisfactory determination of the atomic coord­inates [Kahn et al. (1973). Acta Cryst. B29, 131–138]. The positions of the C atoms cannot be determined directly as a consequence of the disorder in...

Descripción completa

Detalles Bibliográficos
Autores principales: Bernès, Sylvain, Camargo, Sebastian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10171323/
https://www.ncbi.nlm.nih.gov/pubmed/37180346
http://dx.doi.org/10.1107/S2414314623001141
_version_ 1785039402888593408
author Bernès, Sylvain
Camargo, Sebastian
author_facet Bernès, Sylvain
Camargo, Sebastian
author_sort Bernès, Sylvain
collection PubMed
description The plastic phase of cyclohexane (polymorph I) was studied by Kahn and co-workers, without achieving a satisfactory determination of the atomic coord­inates [Kahn et al. (1973). Acta Cryst. B29, 131–138]. The positions of the C atoms cannot be determined directly as a consequence of the disorder in a high-symmetry space group, an inherent feature of plastic materials. Given this situation, the building of a polyhedron describing the disorder was the main tool for determining the molecular structure in the present work. Based on the shape of reflections {111}, {200} and {113} in space group Fm 3 m, we assumed that cyclohexane is disordered through the action of rotation group 432. The polyhedral cluster of disordered molecules is then a rhombic dodecahedron centred on the nodes of an fcc Bravais lattice. The vertices of this polyhedron are the positions of C atoms for the cyclohexane molecule, which is disordered over 24 positions. With such a model, the asymmetric unit is reduced to two C atoms placed on special positions, and an acceptable fit between the observed and calculated structure factors is obtained. [Image: see text]
format Online
Article
Text
id pubmed-10171323
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher International Union of Crystallography
record_format MEDLINE/PubMed
spelling pubmed-101713232023-05-11 Cyclo­hexane plastic phase I: single-crystal diffraction images and new structural model Bernès, Sylvain Camargo, Sebastian IUCrdata Raw Data Letters The plastic phase of cyclohexane (polymorph I) was studied by Kahn and co-workers, without achieving a satisfactory determination of the atomic coord­inates [Kahn et al. (1973). Acta Cryst. B29, 131–138]. The positions of the C atoms cannot be determined directly as a consequence of the disorder in a high-symmetry space group, an inherent feature of plastic materials. Given this situation, the building of a polyhedron describing the disorder was the main tool for determining the molecular structure in the present work. Based on the shape of reflections {111}, {200} and {113} in space group Fm 3 m, we assumed that cyclohexane is disordered through the action of rotation group 432. The polyhedral cluster of disordered molecules is then a rhombic dodecahedron centred on the nodes of an fcc Bravais lattice. The vertices of this polyhedron are the positions of C atoms for the cyclohexane molecule, which is disordered over 24 positions. With such a model, the asymmetric unit is reduced to two C atoms placed on special positions, and an acceptable fit between the observed and calculated structure factors is obtained. [Image: see text] International Union of Crystallography 2023-03-02 /pmc/articles/PMC10171323/ /pubmed/37180346 http://dx.doi.org/10.1107/S2414314623001141 Text en © Bernes and Camargo 2023 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Raw Data Letters
Bernès, Sylvain
Camargo, Sebastian
Cyclo­hexane plastic phase I: single-crystal diffraction images and new structural model
title Cyclo­hexane plastic phase I: single-crystal diffraction images and new structural model
title_full Cyclo­hexane plastic phase I: single-crystal diffraction images and new structural model
title_fullStr Cyclo­hexane plastic phase I: single-crystal diffraction images and new structural model
title_full_unstemmed Cyclo­hexane plastic phase I: single-crystal diffraction images and new structural model
title_short Cyclo­hexane plastic phase I: single-crystal diffraction images and new structural model
title_sort cyclo­hexane plastic phase i: single-crystal diffraction images and new structural model
topic Raw Data Letters
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10171323/
https://www.ncbi.nlm.nih.gov/pubmed/37180346
http://dx.doi.org/10.1107/S2414314623001141
work_keys_str_mv AT bernessylvain cyclohexaneplasticphaseisinglecrystaldiffractionimagesandnewstructuralmodel
AT camargosebastian cyclohexaneplasticphaseisinglecrystaldiffractionimagesandnewstructuralmodel