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Effective encoder-decoder neural network for segmentation of orbital tissue in computed tomography images of Graves’ orbitopathy patients

PURPOSE: To propose a neural network (NN) that can effectively segment orbital tissue in computed tomography (CT) images of Graves’ orbitopathy (GO) patients. METHODS: We analyzed orbital CT scans from 701 GO patients diagnosed between 2010 and 2019 and devised an effective NN specializing in semant...

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Autores principales: Lee, Seung Hyeun, Lee, Sanghyuck, Lee, Jaesung, Lee, Jeong Kyu, Moon, Nam Ju
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10171592/
https://www.ncbi.nlm.nih.gov/pubmed/37163543
http://dx.doi.org/10.1371/journal.pone.0285488
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author Lee, Seung Hyeun
Lee, Sanghyuck
Lee, Jaesung
Lee, Jeong Kyu
Moon, Nam Ju
author_facet Lee, Seung Hyeun
Lee, Sanghyuck
Lee, Jaesung
Lee, Jeong Kyu
Moon, Nam Ju
author_sort Lee, Seung Hyeun
collection PubMed
description PURPOSE: To propose a neural network (NN) that can effectively segment orbital tissue in computed tomography (CT) images of Graves’ orbitopathy (GO) patients. METHODS: We analyzed orbital CT scans from 701 GO patients diagnosed between 2010 and 2019 and devised an effective NN specializing in semantic orbital tissue segmentation in GO patients’ CT images. After four conventional (Attention U-Net, DeepLab V3+, SegNet, and HarDNet-MSEG) and the proposed NN train the various manual orbital tissue segmentations, we calculated the Dice coefficient and Intersection over Union for comparison. RESULTS: CT images of the eyeball, four rectus muscles, the optic nerve, and the lacrimal gland tissues from all 701 patients were analyzed in this study. In the axial image with the largest eyeball area, the proposed NN achieved the best performance, with Dice coefficients of 98.2% for the eyeball, 94.1% for the optic nerve, 93.0% for the medial rectus muscle, and 91.1% for the lateral rectus muscle. The proposed NN also gave the best performance for the coronal image. Our qualitative analysis demonstrated that the proposed NN outputs provided more sophisticated orbital tissue segmentations for GO patients than the conventional NNs. CONCLUSION: We concluded that our proposed NN exhibited an improved CT image segmentation for GO patients over conventional NNs designed for semantic segmentation tasks.
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spelling pubmed-101715922023-05-11 Effective encoder-decoder neural network for segmentation of orbital tissue in computed tomography images of Graves’ orbitopathy patients Lee, Seung Hyeun Lee, Sanghyuck Lee, Jaesung Lee, Jeong Kyu Moon, Nam Ju PLoS One Research Article PURPOSE: To propose a neural network (NN) that can effectively segment orbital tissue in computed tomography (CT) images of Graves’ orbitopathy (GO) patients. METHODS: We analyzed orbital CT scans from 701 GO patients diagnosed between 2010 and 2019 and devised an effective NN specializing in semantic orbital tissue segmentation in GO patients’ CT images. After four conventional (Attention U-Net, DeepLab V3+, SegNet, and HarDNet-MSEG) and the proposed NN train the various manual orbital tissue segmentations, we calculated the Dice coefficient and Intersection over Union for comparison. RESULTS: CT images of the eyeball, four rectus muscles, the optic nerve, and the lacrimal gland tissues from all 701 patients were analyzed in this study. In the axial image with the largest eyeball area, the proposed NN achieved the best performance, with Dice coefficients of 98.2% for the eyeball, 94.1% for the optic nerve, 93.0% for the medial rectus muscle, and 91.1% for the lateral rectus muscle. The proposed NN also gave the best performance for the coronal image. Our qualitative analysis demonstrated that the proposed NN outputs provided more sophisticated orbital tissue segmentations for GO patients than the conventional NNs. CONCLUSION: We concluded that our proposed NN exhibited an improved CT image segmentation for GO patients over conventional NNs designed for semantic segmentation tasks. Public Library of Science 2023-05-10 /pmc/articles/PMC10171592/ /pubmed/37163543 http://dx.doi.org/10.1371/journal.pone.0285488 Text en © 2023 Lee et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Lee, Seung Hyeun
Lee, Sanghyuck
Lee, Jaesung
Lee, Jeong Kyu
Moon, Nam Ju
Effective encoder-decoder neural network for segmentation of orbital tissue in computed tomography images of Graves’ orbitopathy patients
title Effective encoder-decoder neural network for segmentation of orbital tissue in computed tomography images of Graves’ orbitopathy patients
title_full Effective encoder-decoder neural network for segmentation of orbital tissue in computed tomography images of Graves’ orbitopathy patients
title_fullStr Effective encoder-decoder neural network for segmentation of orbital tissue in computed tomography images of Graves’ orbitopathy patients
title_full_unstemmed Effective encoder-decoder neural network for segmentation of orbital tissue in computed tomography images of Graves’ orbitopathy patients
title_short Effective encoder-decoder neural network for segmentation of orbital tissue in computed tomography images of Graves’ orbitopathy patients
title_sort effective encoder-decoder neural network for segmentation of orbital tissue in computed tomography images of graves’ orbitopathy patients
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10171592/
https://www.ncbi.nlm.nih.gov/pubmed/37163543
http://dx.doi.org/10.1371/journal.pone.0285488
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