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Verification of dried blood spot as a sample type for HIV viral load and early infant diagnosis on Hologic Panther in Zambia
OBJECTIVE: Zambia has embarked on improving the diagnostic capacity by setting up high throughput and accurate machines in the testing process and introduction of dried blood spot (DBS) as a sample type. This was a cross sectional study to verify dried blood spot as a sample type for HIV viral load...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10172060/ https://www.ncbi.nlm.nih.gov/pubmed/37165436 http://dx.doi.org/10.1186/s13104-023-06344-9 |
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author | Simushi, Precious Kalunga, Mukoshya Nchima Mwakyoma, Tuku Mwewa, Mulenga Muchaili, Lweendo Hazeemba, Nchimunya Mulenga, Chileshe Mwewa, Patience Chiyenu, Kaseya O. R. Kachimba, John Choonga, Powell Shibemba, Aaron Hamooya, Benison M. Zambwe, Mowa Chipimo, Peter J. Kasonka, Lackson |
author_facet | Simushi, Precious Kalunga, Mukoshya Nchima Mwakyoma, Tuku Mwewa, Mulenga Muchaili, Lweendo Hazeemba, Nchimunya Mulenga, Chileshe Mwewa, Patience Chiyenu, Kaseya O. R. Kachimba, John Choonga, Powell Shibemba, Aaron Hamooya, Benison M. Zambwe, Mowa Chipimo, Peter J. Kasonka, Lackson |
author_sort | Simushi, Precious |
collection | PubMed |
description | OBJECTIVE: Zambia has embarked on improving the diagnostic capacity by setting up high throughput and accurate machines in the testing process and introduction of dried blood spot (DBS) as a sample type. This was a cross sectional study to verify dried blood spot as a sample type for HIV viral load and early infant diagnosis (EID) on Hologic Panther platform and Evaluate the analytical performance (precision, linearity and measurement of uncertainty) of the Hologic Panther. RESULTS: The specificity and sensitivity of EID performance of Aptima Quant Dx assay on Hologic panther machine against the gold standard machine COBAS Taqman (CAP/CTM) was 100% with an overall agreement of 100%. The quantitative HIV Viral Load (VL) accuracy had a positive correlation of (0.96) obtained against the gold standard (plasma samples) run on COBAS4800 platform. Analytical performance of the Hologic panther machine was evaluated; Precision low positive repeatability 3.50154 and within lab 2.268915 at mean 2.88 concentration and precision high positive repeatability 1.116955 and within lab 2.010677 at mean 5.09 concentration were obtained confirming manufacturers claims. Uncertainty of measurement for this study was found to be ± 71 copies/ml. Linearity studies were determined and all points were within acceptable limits. We therefore recommend DBS as a sample type alternative to plasma for the estimation of HIV-1 viral load and EID diagnosis on the Hologic panther machine. |
format | Online Article Text |
id | pubmed-10172060 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-101720602023-05-12 Verification of dried blood spot as a sample type for HIV viral load and early infant diagnosis on Hologic Panther in Zambia Simushi, Precious Kalunga, Mukoshya Nchima Mwakyoma, Tuku Mwewa, Mulenga Muchaili, Lweendo Hazeemba, Nchimunya Mulenga, Chileshe Mwewa, Patience Chiyenu, Kaseya O. R. Kachimba, John Choonga, Powell Shibemba, Aaron Hamooya, Benison M. Zambwe, Mowa Chipimo, Peter J. Kasonka, Lackson BMC Res Notes Research Note OBJECTIVE: Zambia has embarked on improving the diagnostic capacity by setting up high throughput and accurate machines in the testing process and introduction of dried blood spot (DBS) as a sample type. This was a cross sectional study to verify dried blood spot as a sample type for HIV viral load and early infant diagnosis (EID) on Hologic Panther platform and Evaluate the analytical performance (precision, linearity and measurement of uncertainty) of the Hologic Panther. RESULTS: The specificity and sensitivity of EID performance of Aptima Quant Dx assay on Hologic panther machine against the gold standard machine COBAS Taqman (CAP/CTM) was 100% with an overall agreement of 100%. The quantitative HIV Viral Load (VL) accuracy had a positive correlation of (0.96) obtained against the gold standard (plasma samples) run on COBAS4800 platform. Analytical performance of the Hologic panther machine was evaluated; Precision low positive repeatability 3.50154 and within lab 2.268915 at mean 2.88 concentration and precision high positive repeatability 1.116955 and within lab 2.010677 at mean 5.09 concentration were obtained confirming manufacturers claims. Uncertainty of measurement for this study was found to be ± 71 copies/ml. Linearity studies were determined and all points were within acceptable limits. We therefore recommend DBS as a sample type alternative to plasma for the estimation of HIV-1 viral load and EID diagnosis on the Hologic panther machine. BioMed Central 2023-05-11 /pmc/articles/PMC10172060/ /pubmed/37165436 http://dx.doi.org/10.1186/s13104-023-06344-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Note Simushi, Precious Kalunga, Mukoshya Nchima Mwakyoma, Tuku Mwewa, Mulenga Muchaili, Lweendo Hazeemba, Nchimunya Mulenga, Chileshe Mwewa, Patience Chiyenu, Kaseya O. R. Kachimba, John Choonga, Powell Shibemba, Aaron Hamooya, Benison M. Zambwe, Mowa Chipimo, Peter J. Kasonka, Lackson Verification of dried blood spot as a sample type for HIV viral load and early infant diagnosis on Hologic Panther in Zambia |
title | Verification of dried blood spot as a sample type for HIV viral load and early infant diagnosis on Hologic Panther in Zambia |
title_full | Verification of dried blood spot as a sample type for HIV viral load and early infant diagnosis on Hologic Panther in Zambia |
title_fullStr | Verification of dried blood spot as a sample type for HIV viral load and early infant diagnosis on Hologic Panther in Zambia |
title_full_unstemmed | Verification of dried blood spot as a sample type for HIV viral load and early infant diagnosis on Hologic Panther in Zambia |
title_short | Verification of dried blood spot as a sample type for HIV viral load and early infant diagnosis on Hologic Panther in Zambia |
title_sort | verification of dried blood spot as a sample type for hiv viral load and early infant diagnosis on hologic panther in zambia |
topic | Research Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10172060/ https://www.ncbi.nlm.nih.gov/pubmed/37165436 http://dx.doi.org/10.1186/s13104-023-06344-9 |
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